Protein–RNA interactions for Protein: Q9QUK6

Tlr4, Toll-like receptor 4, mousemouse

Predictions only

Length 835 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr4Q9QUK6 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tlr4Q9QUK6 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Tlr4Q9QUK6 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tlr4Q9QUK6 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tlr4Q9QUK6 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tlr4Q9QUK6 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.86■□□□□ 0.61
Tlr4Q9QUK6 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tlr4Q9QUK6 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Tlr4Q9QUK6 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Tlr4Q9QUK6 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tlr4Q9QUK6 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Tlr4Q9QUK6 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.85■□□□□ 0.61
Tlr4Q9QUK6 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.85■□□□□ 0.61
Tlr4Q9QUK6 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Tlr4Q9QUK6 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tlr4Q9QUK6 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Tlr4Q9QUK6 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.85■□□□□ 0.61
Tlr4Q9QUK6 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tlr4Q9QUK6 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Tlr4Q9QUK6 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tlr4Q9QUK6 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Tlr4Q9QUK6 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Tlr4Q9QUK6 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Tlr4Q9QUK6 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tlr4Q9QUK6 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tlr4Q9QUK6 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Tlr4Q9QUK6 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Tlr4Q9QUK6 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Tlr4Q9QUK6 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Tlr4Q9QUK6 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.84■□□□□ 0.61
Tlr4Q9QUK6 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tlr4Q9QUK6 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Tlr4Q9QUK6 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.84■□□□□ 0.61
Tlr4Q9QUK6 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tlr4Q9QUK6 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Tlr4Q9QUK6 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tlr4Q9QUK6 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Tlr4Q9QUK6 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Tlr4Q9QUK6 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Tlr4Q9QUK6 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC18.83■□□□□ 0.6
Tlr4Q9QUK6 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Tlr4Q9QUK6 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Tlr4Q9QUK6 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tlr4Q9QUK6 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tlr4Q9QUK6 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Tlr4Q9QUK6 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tlr4Q9QUK6 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tlr4Q9QUK6 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tlr4Q9QUK6 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tlr4Q9QUK6 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tlr4Q9QUK6 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tlr4Q9QUK6 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Tlr4Q9QUK6 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.82■□□□□ 0.6
Tlr4Q9QUK6 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tlr4Q9QUK6 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
Tlr4Q9QUK6 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tlr4Q9QUK6 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tlr4Q9QUK6 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tlr4Q9QUK6 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tlr4Q9QUK6 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Tlr4Q9QUK6 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tlr4Q9QUK6 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
Tlr4Q9QUK6 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Tlr4Q9QUK6 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tlr4Q9QUK6 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tlr4Q9QUK6 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tlr4Q9QUK6 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.81■□□□□ 0.6
Tlr4Q9QUK6 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tlr4Q9QUK6 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tlr4Q9QUK6 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.8■□□□□ 0.6
Tlr4Q9QUK6 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tlr4Q9QUK6 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.8■□□□□ 0.6
Tlr4Q9QUK6 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tlr4Q9QUK6 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tlr4Q9QUK6 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.8■□□□□ 0.6
Tlr4Q9QUK6 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tlr4Q9QUK6 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tlr4Q9QUK6 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tlr4Q9QUK6 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tlr4Q9QUK6 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tlr4Q9QUK6 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
Tlr4Q9QUK6 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tlr4Q9QUK6 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Tlr4Q9QUK6 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tlr4Q9QUK6 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Tlr4Q9QUK6 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.79■□□□□ 0.6
Tlr4Q9QUK6 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.79■□□□□ 0.6
Tlr4Q9QUK6 Ap3s1-204ENSMUST00000225520 957 ntBASIC18.79■□□□□ 0.6
Tlr4Q9QUK6 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Tlr4Q9QUK6 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Tlr4Q9QUK6 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tlr4Q9QUK6 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tlr4Q9QUK6 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tlr4Q9QUK6 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tlr4Q9QUK6 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tlr4Q9QUK6 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Tlr4Q9QUK6 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tlr4Q9QUK6 Gm7514-201ENSMUST00000209475 934 ntBASIC18.78■□□□□ 0.6
Tlr4Q9QUK6 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tlr4Q9QUK6 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms