Protein–RNA interactions for Protein: Q9JJ94

Ssna1, Sjoegren syndrome nuclear autoantigen 1 homolog, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssna1Q9JJ94 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ssna1Q9JJ94 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ssna1Q9JJ94 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ssna1Q9JJ94 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC15.73■□□□□ 0.11
Ssna1Q9JJ94 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ssna1Q9JJ94 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ssna1Q9JJ94 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ssna1Q9JJ94 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC15.73■□□□□ 0.11
Ssna1Q9JJ94 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ssna1Q9JJ94 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ssna1Q9JJ94 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ssna1Q9JJ94 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ssna1Q9JJ94 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ssna1Q9JJ94 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Ssna1Q9JJ94 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ssna1Q9JJ94 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ssna1Q9JJ94 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Ssna1Q9JJ94 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ssna1Q9JJ94 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ssna1Q9JJ94 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ssna1Q9JJ94 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ssna1Q9JJ94 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ssna1Q9JJ94 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ssna1Q9JJ94 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ssna1Q9JJ94 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC15.72■□□□□ 0.11
Ssna1Q9JJ94 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Ssna1Q9JJ94 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Ssna1Q9JJ94 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ssna1Q9JJ94 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ssna1Q9JJ94 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ssna1Q9JJ94 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ssna1Q9JJ94 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ssna1Q9JJ94 Gm43702-201ENSMUST00000198772 2546 ntBASIC15.71■□□□□ 0.11
Ssna1Q9JJ94 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ssna1Q9JJ94 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Ssna1Q9JJ94 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.71■□□□□ 0.11
Ssna1Q9JJ94 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ssna1Q9JJ94 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Ssna1Q9JJ94 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Ssna1Q9JJ94 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC15.71■□□□□ 0.11
Ssna1Q9JJ94 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ssna1Q9JJ94 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ssna1Q9JJ94 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ssna1Q9JJ94 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Ssna1Q9JJ94 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ssna1Q9JJ94 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC15.71■□□□□ 0.11
Ssna1Q9JJ94 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ssna1Q9JJ94 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ssna1Q9JJ94 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ssna1Q9JJ94 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ssna1Q9JJ94 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC15.71■□□□□ 0.1
Ssna1Q9JJ94 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ssna1Q9JJ94 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ssna1Q9JJ94 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ssna1Q9JJ94 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Ssna1Q9JJ94 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ssna1Q9JJ94 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC15.7■□□□□ 0.1
Ssna1Q9JJ94 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ssna1Q9JJ94 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ssna1Q9JJ94 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ssna1Q9JJ94 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Ssna1Q9JJ94 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC15.7■□□□□ 0.1
Ssna1Q9JJ94 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
Ssna1Q9JJ94 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ssna1Q9JJ94 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ssna1Q9JJ94 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ssna1Q9JJ94 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ssna1Q9JJ94 Fst-202ENSMUST00000223640 2612 ntBASIC15.69■□□□□ 0.1
Ssna1Q9JJ94 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Ssna1Q9JJ94 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ssna1Q9JJ94 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ssna1Q9JJ94 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ssna1Q9JJ94 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ssna1Q9JJ94 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ssna1Q9JJ94 Nkain2-201ENSMUST00000092602 558 ntBASIC15.69■□□□□ 0.1
Ssna1Q9JJ94 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Ssna1Q9JJ94 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ssna1Q9JJ94 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ssna1Q9JJ94 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC15.69■□□□□ 0.1
Ssna1Q9JJ94 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ssna1Q9JJ94 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ssna1Q9JJ94 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ssna1Q9JJ94 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ssna1Q9JJ94 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ssna1Q9JJ94 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ssna1Q9JJ94 Gm6802-201ENSMUST00000167843 1983 ntBASIC15.68■□□□□ 0.1
Ssna1Q9JJ94 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ssna1Q9JJ94 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ssna1Q9JJ94 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ssna1Q9JJ94 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ssna1Q9JJ94 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ssna1Q9JJ94 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ssna1Q9JJ94 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ssna1Q9JJ94 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ssna1Q9JJ94 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ssna1Q9JJ94 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ssna1Q9JJ94 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ssna1Q9JJ94 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Ssna1Q9JJ94 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
Ssna1Q9JJ94 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms