Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tubb3Q9ERD7 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Tubb3Q9ERD7 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Tubb3Q9ERD7 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tubb3Q9ERD7 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.07■□□□□ 0.64
Tubb3Q9ERD7 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Tubb3Q9ERD7 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tubb3Q9ERD7 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Tubb3Q9ERD7 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tubb3Q9ERD7 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tubb3Q9ERD7 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Tubb3Q9ERD7 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Tubb3Q9ERD7 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tubb3Q9ERD7 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tubb3Q9ERD7 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.06■□□□□ 0.64
Tubb3Q9ERD7 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tubb3Q9ERD7 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.06■□□□□ 0.64
Tubb3Q9ERD7 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.06■□□□□ 0.64
Tubb3Q9ERD7 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Tubb3Q9ERD7 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tubb3Q9ERD7 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.06■□□□□ 0.64
Tubb3Q9ERD7 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tubb3Q9ERD7 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Tubb3Q9ERD7 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.06■□□□□ 0.64
Tubb3Q9ERD7 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tubb3Q9ERD7 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tubb3Q9ERD7 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tubb3Q9ERD7 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tubb3Q9ERD7 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tubb3Q9ERD7 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tubb3Q9ERD7 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Tubb3Q9ERD7 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Tubb3Q9ERD7 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Tubb3Q9ERD7 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tubb3Q9ERD7 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
Tubb3Q9ERD7 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Tubb3Q9ERD7 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Tubb3Q9ERD7 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Tubb3Q9ERD7 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.04■□□□□ 0.64
Tubb3Q9ERD7 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Tubb3Q9ERD7 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Tubb3Q9ERD7 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.03■□□□□ 0.64
Tubb3Q9ERD7 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tubb3Q9ERD7 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Tubb3Q9ERD7 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tubb3Q9ERD7 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
Tubb3Q9ERD7 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.03■□□□□ 0.64
Tubb3Q9ERD7 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.03■□□□□ 0.64
Tubb3Q9ERD7 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.03■□□□□ 0.64
Tubb3Q9ERD7 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tubb3Q9ERD7 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Tubb3Q9ERD7 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Tubb3Q9ERD7 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tubb3Q9ERD7 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tubb3Q9ERD7 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Tubb3Q9ERD7 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Tubb3Q9ERD7 Gm18284-201ENSMUST00000172604 624 ntBASIC19.02■□□□□ 0.64
Tubb3Q9ERD7 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Tubb3Q9ERD7 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Tubb3Q9ERD7 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Tubb3Q9ERD7 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tubb3Q9ERD7 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Tubb3Q9ERD7 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.01■□□□□ 0.63
Tubb3Q9ERD7 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tubb3Q9ERD7 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Tubb3Q9ERD7 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.01■□□□□ 0.63
Tubb3Q9ERD7 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Tubb3Q9ERD7 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tubb3Q9ERD7 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tubb3Q9ERD7 Gm8495-201ENSMUST00000188740 694 ntBASIC19.01■□□□□ 0.63
Tubb3Q9ERD7 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tubb3Q9ERD7 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tubb3Q9ERD7 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tubb3Q9ERD7 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tubb3Q9ERD7 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tubb3Q9ERD7 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tubb3Q9ERD7 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Tubb3Q9ERD7 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19■□□□□ 0.63
Tubb3Q9ERD7 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Tubb3Q9ERD7 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
Tubb3Q9ERD7 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Tubb3Q9ERD7 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Tubb3Q9ERD7 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19■□□□□ 0.63
Tubb3Q9ERD7 Gm45640-201ENSMUST00000210665 1896 ntBASIC19■□□□□ 0.63
Tubb3Q9ERD7 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Tubb3Q9ERD7 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Tubb3Q9ERD7 BC021767-201ENSMUST00000126387 1716 ntBASIC19■□□□□ 0.63
Tubb3Q9ERD7 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.99■□□□□ 0.63
Tubb3Q9ERD7 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tubb3Q9ERD7 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tubb3Q9ERD7 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tubb3Q9ERD7 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Tubb3Q9ERD7 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.99■□□□□ 0.63
Tubb3Q9ERD7 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.99■□□□□ 0.63
Tubb3Q9ERD7 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tubb3Q9ERD7 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tubb3Q9ERD7 Gm26833-201ENSMUST00000180899 440 ntBASIC18.99■□□□□ 0.63
Tubb3Q9ERD7 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.99■□□□□ 0.63
Tubb3Q9ERD7 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.99■□□□□ 0.63
Tubb3Q9ERD7 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms