Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Rtp4Q9ER80 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.98■□□□□ 0.47
Rtp4Q9ER80 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rtp4Q9ER80 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rtp4Q9ER80 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.97■□□□□ 0.47
Rtp4Q9ER80 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rtp4Q9ER80 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Rtp4Q9ER80 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Rtp4Q9ER80 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Rtp4Q9ER80 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rtp4Q9ER80 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rtp4Q9ER80 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rtp4Q9ER80 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rtp4Q9ER80 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Rtp4Q9ER80 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.96■□□□□ 0.47
Rtp4Q9ER80 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
Rtp4Q9ER80 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rtp4Q9ER80 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rtp4Q9ER80 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Rtp4Q9ER80 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.96■□□□□ 0.46
Rtp4Q9ER80 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rtp4Q9ER80 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.95■□□□□ 0.46
Rtp4Q9ER80 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rtp4Q9ER80 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rtp4Q9ER80 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rtp4Q9ER80 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rtp4Q9ER80 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.95■□□□□ 0.46
Rtp4Q9ER80 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rtp4Q9ER80 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rtp4Q9ER80 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rtp4Q9ER80 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rtp4Q9ER80 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rtp4Q9ER80 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Rtp4Q9ER80 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Rtp4Q9ER80 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rtp4Q9ER80 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rtp4Q9ER80 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Rtp4Q9ER80 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rtp4Q9ER80 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rtp4Q9ER80 Gm10849-201ENSMUST00000100397 618 ntBASIC17.94■□□□□ 0.46
Rtp4Q9ER80 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
Rtp4Q9ER80 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rtp4Q9ER80 Gm27405-201ENSMUST00000184201 112 ntBASIC17.94■□□□□ 0.46
Rtp4Q9ER80 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.94■□□□□ 0.46
Rtp4Q9ER80 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rtp4Q9ER80 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.94■□□□□ 0.46
Rtp4Q9ER80 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Rtp4Q9ER80 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rtp4Q9ER80 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rtp4Q9ER80 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.94■□□□□ 0.46
Rtp4Q9ER80 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rtp4Q9ER80 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rtp4Q9ER80 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rtp4Q9ER80 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rtp4Q9ER80 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rtp4Q9ER80 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rtp4Q9ER80 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rtp4Q9ER80 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rtp4Q9ER80 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rtp4Q9ER80 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Rtp4Q9ER80 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rtp4Q9ER80 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rtp4Q9ER80 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rtp4Q9ER80 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rtp4Q9ER80 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rtp4Q9ER80 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Rtp4Q9ER80 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.92■□□□□ 0.46
Rtp4Q9ER80 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rtp4Q9ER80 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rtp4Q9ER80 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Rtp4Q9ER80 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.92■□□□□ 0.46
Rtp4Q9ER80 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rtp4Q9ER80 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rtp4Q9ER80 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rtp4Q9ER80 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rtp4Q9ER80 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.91■□□□□ 0.46
Rtp4Q9ER80 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rtp4Q9ER80 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rtp4Q9ER80 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.91■□□□□ 0.46
Rtp4Q9ER80 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rtp4Q9ER80 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rtp4Q9ER80 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rtp4Q9ER80 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rtp4Q9ER80 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rtp4Q9ER80 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rtp4Q9ER80 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rtp4Q9ER80 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rtp4Q9ER80 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rtp4Q9ER80 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rtp4Q9ER80 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.9■□□□□ 0.46
Rtp4Q9ER80 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Rtp4Q9ER80 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.9■□□□□ 0.46
Rtp4Q9ER80 Gm10033-202ENSMUST00000211874 928 ntBASIC17.9■□□□□ 0.46
Rtp4Q9ER80 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rtp4Q9ER80 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rtp4Q9ER80 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rtp4Q9ER80 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rtp4Q9ER80 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Rtp4Q9ER80 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Rtp4Q9ER80 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms