Protein–RNA interactions for Protein: Q9DBA9

Gtf2h1, General transcription factor IIH subunit 1, mousemouse

Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2h1Q9DBA9 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gtf2h1Q9DBA9 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gtf2h1Q9DBA9 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Gtf2h1Q9DBA9 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gtf2h1Q9DBA9 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Gtf2h1Q9DBA9 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gtf2h1Q9DBA9 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gtf2h1Q9DBA9 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gtf2h1Q9DBA9 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gtf2h1Q9DBA9 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gtf2h1Q9DBA9 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.46■□□□□ 0.87
Gtf2h1Q9DBA9 Gm40848-201ENSMUST00000221998 324 ntBASIC20.46■□□□□ 0.87
Gtf2h1Q9DBA9 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
Gtf2h1Q9DBA9 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Gtf2h1Q9DBA9 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.46■□□□□ 0.87
Gtf2h1Q9DBA9 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Gtf2h1Q9DBA9 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.45■□□□□ 0.87
Gtf2h1Q9DBA9 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Gtf2h1Q9DBA9 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Gtf2h1Q9DBA9 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Gtf2h1Q9DBA9 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.45■□□□□ 0.86
Gtf2h1Q9DBA9 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Gtf2h1Q9DBA9 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.45■□□□□ 0.86
Gtf2h1Q9DBA9 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Gtf2h1Q9DBA9 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Gtf2h1Q9DBA9 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.45■□□□□ 0.86
Gtf2h1Q9DBA9 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Gtf2h1Q9DBA9 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Gtf2h1Q9DBA9 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Gtf2h1Q9DBA9 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Gtf2h1Q9DBA9 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Gtf2h1Q9DBA9 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gtf2h1Q9DBA9 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gtf2h1Q9DBA9 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gtf2h1Q9DBA9 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gtf2h1Q9DBA9 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
Gtf2h1Q9DBA9 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.44■□□□□ 0.86
Gtf2h1Q9DBA9 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gtf2h1Q9DBA9 Gm43060-201ENSMUST00000200621 289 ntBASIC20.44■□□□□ 0.86
Gtf2h1Q9DBA9 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gtf2h1Q9DBA9 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Gtf2h1Q9DBA9 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Gtf2h1Q9DBA9 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Gtf2h1Q9DBA9 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gtf2h1Q9DBA9 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Gtf2h1Q9DBA9 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Gtf2h1Q9DBA9 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Gtf2h1Q9DBA9 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Gtf2h1Q9DBA9 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
Gtf2h1Q9DBA9 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
Gtf2h1Q9DBA9 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.43■□□□□ 0.86
Gtf2h1Q9DBA9 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gtf2h1Q9DBA9 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.43■□□□□ 0.86
Gtf2h1Q9DBA9 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gtf2h1Q9DBA9 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gtf2h1Q9DBA9 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gtf2h1Q9DBA9 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Gtf2h1Q9DBA9 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Gtf2h1Q9DBA9 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gtf2h1Q9DBA9 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Gtf2h1Q9DBA9 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Gtf2h1Q9DBA9 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Gtf2h1Q9DBA9 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Gtf2h1Q9DBA9 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.42■□□□□ 0.86
Gtf2h1Q9DBA9 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Gtf2h1Q9DBA9 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Gtf2h1Q9DBA9 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Gtf2h1Q9DBA9 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Gtf2h1Q9DBA9 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Gtf2h1Q9DBA9 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Gtf2h1Q9DBA9 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.41■□□□□ 0.86
Gtf2h1Q9DBA9 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gtf2h1Q9DBA9 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Gtf2h1Q9DBA9 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.41■□□□□ 0.86
Gtf2h1Q9DBA9 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.41■□□□□ 0.86
Gtf2h1Q9DBA9 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gtf2h1Q9DBA9 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Gtf2h1Q9DBA9 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Gtf2h1Q9DBA9 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gtf2h1Q9DBA9 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gtf2h1Q9DBA9 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
Gtf2h1Q9DBA9 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Gtf2h1Q9DBA9 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gtf2h1Q9DBA9 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
Gtf2h1Q9DBA9 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
Gtf2h1Q9DBA9 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Gtf2h1Q9DBA9 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.4■□□□□ 0.86
Gtf2h1Q9DBA9 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.4■□□□□ 0.86
Gtf2h1Q9DBA9 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Gtf2h1Q9DBA9 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
Gtf2h1Q9DBA9 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Gtf2h1Q9DBA9 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Gtf2h1Q9DBA9 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gtf2h1Q9DBA9 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Gtf2h1Q9DBA9 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Gtf2h1Q9DBA9 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gtf2h1Q9DBA9 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gtf2h1Q9DBA9 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Gtf2h1Q9DBA9 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Gtf2h1Q9DBA9 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms