Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Rrp8Q9DB85 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC18.85■□□□□ 0.61
Rrp8Q9DB85 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.85■□□□□ 0.61
Rrp8Q9DB85 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.85■□□□□ 0.61
Rrp8Q9DB85 Gm10252-201ENSMUST00000209541 832 ntBASIC18.85■□□□□ 0.61
Rrp8Q9DB85 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rrp8Q9DB85 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rrp8Q9DB85 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Rrp8Q9DB85 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rrp8Q9DB85 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rrp8Q9DB85 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rrp8Q9DB85 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rrp8Q9DB85 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rrp8Q9DB85 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Rrp8Q9DB85 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Rrp8Q9DB85 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.84■□□□□ 0.61
Rrp8Q9DB85 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Rrp8Q9DB85 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rrp8Q9DB85 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.84■□□□□ 0.61
Rrp8Q9DB85 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rrp8Q9DB85 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
Rrp8Q9DB85 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rrp8Q9DB85 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rrp8Q9DB85 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rrp8Q9DB85 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rrp8Q9DB85 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rrp8Q9DB85 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rrp8Q9DB85 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rrp8Q9DB85 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
Rrp8Q9DB85 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rrp8Q9DB85 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rrp8Q9DB85 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.83■□□□□ 0.61
Rrp8Q9DB85 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rrp8Q9DB85 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rrp8Q9DB85 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.6
Rrp8Q9DB85 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rrp8Q9DB85 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.83■□□□□ 0.6
Rrp8Q9DB85 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.83■□□□□ 0.6
Rrp8Q9DB85 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Rrp8Q9DB85 Gm10812-201ENSMUST00000099864 546 ntBASIC18.83■□□□□ 0.6
Rrp8Q9DB85 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.83■□□□□ 0.6
Rrp8Q9DB85 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
Rrp8Q9DB85 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rrp8Q9DB85 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rrp8Q9DB85 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rrp8Q9DB85 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.82■□□□□ 0.6
Rrp8Q9DB85 Gm7860-201ENSMUST00000121190 879 ntBASIC18.82■□□□□ 0.6
Rrp8Q9DB85 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.82■□□□□ 0.6
Rrp8Q9DB85 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rrp8Q9DB85 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rrp8Q9DB85 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rrp8Q9DB85 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.82■□□□□ 0.6
Rrp8Q9DB85 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.82■□□□□ 0.6
Rrp8Q9DB85 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.82■□□□□ 0.6
Rrp8Q9DB85 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.82■□□□□ 0.6
Rrp8Q9DB85 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rrp8Q9DB85 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rrp8Q9DB85 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
Rrp8Q9DB85 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rrp8Q9DB85 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rrp8Q9DB85 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rrp8Q9DB85 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rrp8Q9DB85 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Rrp8Q9DB85 Gm37856-201ENSMUST00000191634 999 ntBASIC18.81■□□□□ 0.6
Rrp8Q9DB85 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC18.81■□□□□ 0.6
Rrp8Q9DB85 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.81■□□□□ 0.6
Rrp8Q9DB85 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rrp8Q9DB85 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Rrp8Q9DB85 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Rrp8Q9DB85 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rrp8Q9DB85 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rrp8Q9DB85 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rrp8Q9DB85 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rrp8Q9DB85 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rrp8Q9DB85 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC18.8■□□□□ 0.6
Rrp8Q9DB85 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.8■□□□□ 0.6
Rrp8Q9DB85 Trmt13-210ENSMUST00000198454 880 ntBASIC18.8■□□□□ 0.6
Rrp8Q9DB85 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.8■□□□□ 0.6
Rrp8Q9DB85 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rrp8Q9DB85 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rrp8Q9DB85 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.8■□□□□ 0.6
Rrp8Q9DB85 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rrp8Q9DB85 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Rrp8Q9DB85 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rrp8Q9DB85 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Rrp8Q9DB85 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Rrp8Q9DB85 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rrp8Q9DB85 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rrp8Q9DB85 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rrp8Q9DB85 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rrp8Q9DB85 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rrp8Q9DB85 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rrp8Q9DB85 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rrp8Q9DB85 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rrp8Q9DB85 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
Rrp8Q9DB85 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rrp8Q9DB85 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rrp8Q9DB85 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.78■□□□□ 0.6
Rrp8Q9DB85 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rrp8Q9DB85 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms