Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Chmp2aQ9DB34 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Chmp2aQ9DB34 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Chmp2aQ9DB34 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Chmp2aQ9DB34 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Chmp2aQ9DB34 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Chmp2aQ9DB34 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20■□□□□ 0.79
Chmp2aQ9DB34 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20■□□□□ 0.79
Chmp2aQ9DB34 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Chmp2aQ9DB34 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Chmp2aQ9DB34 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Chmp2aQ9DB34 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Chmp2aQ9DB34 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Chmp2aQ9DB34 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Chmp2aQ9DB34 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Chmp2aQ9DB34 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Chmp2aQ9DB34 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Chmp2aQ9DB34 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Chmp2aQ9DB34 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Chmp2aQ9DB34 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
Chmp2aQ9DB34 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Chmp2aQ9DB34 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Chmp2aQ9DB34 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Chmp2aQ9DB34 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chmp2aQ9DB34 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chmp2aQ9DB34 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chmp2aQ9DB34 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.98■□□□□ 0.79
Chmp2aQ9DB34 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.98■□□□□ 0.79
Chmp2aQ9DB34 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chmp2aQ9DB34 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chmp2aQ9DB34 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chmp2aQ9DB34 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Chmp2aQ9DB34 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.98■□□□□ 0.79
Chmp2aQ9DB34 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Chmp2aQ9DB34 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chmp2aQ9DB34 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Chmp2aQ9DB34 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chmp2aQ9DB34 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chmp2aQ9DB34 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chmp2aQ9DB34 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Chmp2aQ9DB34 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chmp2aQ9DB34 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chmp2aQ9DB34 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chmp2aQ9DB34 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Chmp2aQ9DB34 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chmp2aQ9DB34 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Chmp2aQ9DB34 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.96■□□□□ 0.79
Chmp2aQ9DB34 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chmp2aQ9DB34 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chmp2aQ9DB34 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
Chmp2aQ9DB34 Gm27801-201ENSMUST00000184174 223 ntBASIC19.96■□□□□ 0.79
Chmp2aQ9DB34 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Chmp2aQ9DB34 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chmp2aQ9DB34 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chmp2aQ9DB34 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Chmp2aQ9DB34 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chmp2aQ9DB34 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chmp2aQ9DB34 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chmp2aQ9DB34 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chmp2aQ9DB34 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Chmp2aQ9DB34 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.95■□□□□ 0.78
Chmp2aQ9DB34 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.95■□□□□ 0.78
Chmp2aQ9DB34 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Chmp2aQ9DB34 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Chmp2aQ9DB34 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chmp2aQ9DB34 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chmp2aQ9DB34 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chmp2aQ9DB34 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chmp2aQ9DB34 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Chmp2aQ9DB34 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Chmp2aQ9DB34 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Chmp2aQ9DB34 Golph3-202ENSMUST00000226517 2359 ntBASIC19.94■□□□□ 0.78
Chmp2aQ9DB34 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chmp2aQ9DB34 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.94■□□□□ 0.78
Chmp2aQ9DB34 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.94■□□□□ 0.78
Chmp2aQ9DB34 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.94■□□□□ 0.78
Chmp2aQ9DB34 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chmp2aQ9DB34 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chmp2aQ9DB34 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chmp2aQ9DB34 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Chmp2aQ9DB34 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC19.93■□□□□ 0.78
Chmp2aQ9DB34 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.93■□□□□ 0.78
Chmp2aQ9DB34 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp2aQ9DB34 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.93■□□□□ 0.78
Chmp2aQ9DB34 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Chmp2aQ9DB34 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp2aQ9DB34 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp2aQ9DB34 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Chmp2aQ9DB34 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.92■□□□□ 0.78
Chmp2aQ9DB34 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.92■□□□□ 0.78
Chmp2aQ9DB34 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Chmp2aQ9DB34 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Chmp2aQ9DB34 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chmp2aQ9DB34 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Chmp2aQ9DB34 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Chmp2aQ9DB34 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Chmp2aQ9DB34 Gm9988-201ENSMUST00000069786 435 ntBASIC19.92■□□□□ 0.78
Chmp2aQ9DB34 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Chmp2aQ9DB34 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Chmp2aQ9DB34 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms