Protein–RNA interactions for Protein: Q9D506

Gm3404, Predicted gene 3404, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3404Q9D506 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Gm3404Q9D506 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Gm3404Q9D506 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Gm3404Q9D506 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.37■□□□□ 0.85
Gm3404Q9D506 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.37■□□□□ 0.85
Gm3404Q9D506 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.37■□□□□ 0.85
Gm3404Q9D506 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
Gm3404Q9D506 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.37■□□□□ 0.85
Gm3404Q9D506 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.37■□□□□ 0.85
Gm3404Q9D506 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Gm3404Q9D506 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Gm3404Q9D506 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Gm3404Q9D506 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Gm3404Q9D506 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Gm3404Q9D506 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm3404Q9D506 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Gm3404Q9D506 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm3404Q9D506 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm3404Q9D506 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm3404Q9D506 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Gm3404Q9D506 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Gm3404Q9D506 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Gm3404Q9D506 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Gm3404Q9D506 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Gm3404Q9D506 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Gm3404Q9D506 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.35■□□□□ 0.85
Gm3404Q9D506 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.35■□□□□ 0.85
Gm3404Q9D506 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Gm3404Q9D506 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Gm3404Q9D506 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Gm3404Q9D506 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm3404Q9D506 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.34■□□□□ 0.85
Gm3404Q9D506 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Gm3404Q9D506 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Gm3404Q9D506 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm3404Q9D506 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm3404Q9D506 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Gm3404Q9D506 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm3404Q9D506 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Gm3404Q9D506 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm3404Q9D506 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm3404Q9D506 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Gm3404Q9D506 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Gm3404Q9D506 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gm3404Q9D506 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gm3404Q9D506 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Gm3404Q9D506 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20.33■□□□□ 0.85
Gm3404Q9D506 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Gm3404Q9D506 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC20.33■□□□□ 0.85
Gm3404Q9D506 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gm3404Q9D506 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.33■□□□□ 0.85
Gm3404Q9D506 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Gm3404Q9D506 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Gm3404Q9D506 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Gm3404Q9D506 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Gm3404Q9D506 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.32■□□□□ 0.84
Gm3404Q9D506 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.32■□□□□ 0.84
Gm3404Q9D506 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Gm3404Q9D506 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Gm3404Q9D506 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm3404Q9D506 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Gm3404Q9D506 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Gm3404Q9D506 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm3404Q9D506 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Gm3404Q9D506 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.31■□□□□ 0.84
Gm3404Q9D506 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.31■□□□□ 0.84
Gm3404Q9D506 Golph3-202ENSMUST00000226517 2359 ntBASIC20.31■□□□□ 0.84
Gm3404Q9D506 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm3404Q9D506 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.31■□□□□ 0.84
Gm3404Q9D506 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm3404Q9D506 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Gm3404Q9D506 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm3404Q9D506 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm3404Q9D506 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Gm3404Q9D506 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm3404Q9D506 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm3404Q9D506 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Gm3404Q9D506 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm3404Q9D506 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm3404Q9D506 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC20.3■□□□□ 0.84
Gm3404Q9D506 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Gm3404Q9D506 Gm9988-201ENSMUST00000069786 435 ntBASIC20.3■□□□□ 0.84
Gm3404Q9D506 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm3404Q9D506 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.3■□□□□ 0.84
Gm3404Q9D506 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Gm3404Q9D506 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm3404Q9D506 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Gm3404Q9D506 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Gm3404Q9D506 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Gm3404Q9D506 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm3404Q9D506 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Gm3404Q9D506 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.29■□□□□ 0.84
Gm3404Q9D506 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm3404Q9D506 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm3404Q9D506 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm3404Q9D506 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Gm3404Q9D506 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.29■□□□□ 0.84
Gm3404Q9D506 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Gm3404Q9D506 Notumos-201ENSMUST00000151998 2659 ntBASIC20.29■□□□□ 0.84
Gm3404Q9D506 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms