Protein–RNA interactions for Protein: Q9D439

Cfap53, Cilia- and flagella-associated protein 53, mousemouse

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap53Q9D439 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cfap53Q9D439 Golph3-202ENSMUST00000226517 2359 ntBASIC21.02■□□□□ 0.96
Cfap53Q9D439 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cfap53Q9D439 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC21.02■□□□□ 0.95
Cfap53Q9D439 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cfap53Q9D439 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cfap53Q9D439 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC21.01■□□□□ 0.95
Cfap53Q9D439 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Cfap53Q9D439 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Cfap53Q9D439 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Cfap53Q9D439 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC21.01■□□□□ 0.95
Cfap53Q9D439 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Cfap53Q9D439 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cfap53Q9D439 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cfap53Q9D439 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cfap53Q9D439 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Cfap53Q9D439 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cfap53Q9D439 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Cfap53Q9D439 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC21■□□□□ 0.95
Cfap53Q9D439 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Cfap53Q9D439 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Cfap53Q9D439 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cfap53Q9D439 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cfap53Q9D439 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cfap53Q9D439 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cfap53Q9D439 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
Cfap53Q9D439 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC21■□□□□ 0.95
Cfap53Q9D439 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Cfap53Q9D439 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cfap53Q9D439 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.99■□□□□ 0.95
Cfap53Q9D439 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Cfap53Q9D439 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.99■□□□□ 0.95
Cfap53Q9D439 Gm43017-201ENSMUST00000198296 752 ntBASIC20.99■□□□□ 0.95
Cfap53Q9D439 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cfap53Q9D439 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cfap53Q9D439 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Cfap53Q9D439 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cfap53Q9D439 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Cfap53Q9D439 Gm26833-201ENSMUST00000180899 440 ntBASIC20.98■□□□□ 0.95
Cfap53Q9D439 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cfap53Q9D439 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cfap53Q9D439 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Cfap53Q9D439 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Cfap53Q9D439 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Cfap53Q9D439 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cfap53Q9D439 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cfap53Q9D439 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Cfap53Q9D439 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Cfap53Q9D439 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.97■□□□□ 0.95
Cfap53Q9D439 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Cfap53Q9D439 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cfap53Q9D439 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cfap53Q9D439 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cfap53Q9D439 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Cfap53Q9D439 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cfap53Q9D439 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cfap53Q9D439 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cfap53Q9D439 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cfap53Q9D439 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.96■□□□□ 0.95
Cfap53Q9D439 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.95■□□□□ 0.94
Cfap53Q9D439 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cfap53Q9D439 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cfap53Q9D439 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Cfap53Q9D439 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Cfap53Q9D439 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cfap53Q9D439 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cfap53Q9D439 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Cfap53Q9D439 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cfap53Q9D439 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cfap53Q9D439 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cfap53Q9D439 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Cfap53Q9D439 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cfap53Q9D439 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC20.94■□□□□ 0.94
Cfap53Q9D439 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Cfap53Q9D439 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cfap53Q9D439 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.94■□□□□ 0.94
Cfap53Q9D439 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cfap53Q9D439 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.94■□□□□ 0.94
Cfap53Q9D439 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Cfap53Q9D439 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Cfap53Q9D439 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cfap53Q9D439 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cfap53Q9D439 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cfap53Q9D439 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cfap53Q9D439 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cfap53Q9D439 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.93■□□□□ 0.94
Cfap53Q9D439 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.93■□□□□ 0.94
Cfap53Q9D439 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.93■□□□□ 0.94
Cfap53Q9D439 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Cfap53Q9D439 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cfap53Q9D439 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cfap53Q9D439 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cfap53Q9D439 Gm40848-201ENSMUST00000221998 324 ntBASIC20.92■□□□□ 0.94
Cfap53Q9D439 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Cfap53Q9D439 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cfap53Q9D439 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Cfap53Q9D439 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
Cfap53Q9D439 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cfap53Q9D439 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cfap53Q9D439 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms