Protein–RNA interactions for Protein: Q9D3S3

Snx29, Sorting nexin-29, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx29Q9D3S3 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC21.23■□□□□ 0.99
Snx29Q9D3S3 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Snx29Q9D3S3 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Snx29Q9D3S3 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Snx29Q9D3S3 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
Snx29Q9D3S3 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Snx29Q9D3S3 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Snx29Q9D3S3 Gm37563-201ENSMUST00000192580 1513 ntBASIC21.23■□□□□ 0.99
Snx29Q9D3S3 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Snx29Q9D3S3 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Snx29Q9D3S3 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Snx29Q9D3S3 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Snx29Q9D3S3 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Snx29Q9D3S3 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Snx29Q9D3S3 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC21.22■□□□□ 0.99
Snx29Q9D3S3 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Snx29Q9D3S3 Gm44672-201ENSMUST00000206944 1098 ntBASIC21.22■□□□□ 0.99
Snx29Q9D3S3 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Snx29Q9D3S3 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Snx29Q9D3S3 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC21.21■□□□□ 0.99
Snx29Q9D3S3 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC21.21■□□□□ 0.99
Snx29Q9D3S3 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Snx29Q9D3S3 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC21.21■□□□□ 0.99
Snx29Q9D3S3 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.21■□□□□ 0.99
Snx29Q9D3S3 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Snx29Q9D3S3 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Snx29Q9D3S3 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Snx29Q9D3S3 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Snx29Q9D3S3 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Snx29Q9D3S3 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
Snx29Q9D3S3 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Snx29Q9D3S3 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Snx29Q9D3S3 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Snx29Q9D3S3 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC21.2■□□□□ 0.98
Snx29Q9D3S3 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Snx29Q9D3S3 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Snx29Q9D3S3 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC21.2■□□□□ 0.98
Snx29Q9D3S3 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Snx29Q9D3S3 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Snx29Q9D3S3 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Snx29Q9D3S3 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Snx29Q9D3S3 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Snx29Q9D3S3 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Snx29Q9D3S3 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Snx29Q9D3S3 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Snx29Q9D3S3 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.19■□□□□ 0.98
Snx29Q9D3S3 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Snx29Q9D3S3 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Snx29Q9D3S3 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Snx29Q9D3S3 Trmt13-210ENSMUST00000198454 880 ntBASIC21.19■□□□□ 0.98
Snx29Q9D3S3 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
Snx29Q9D3S3 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC21.19■□□□□ 0.98
Snx29Q9D3S3 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC21.19■□□□□ 0.98
Snx29Q9D3S3 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Snx29Q9D3S3 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Snx29Q9D3S3 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Snx29Q9D3S3 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Snx29Q9D3S3 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Snx29Q9D3S3 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Snx29Q9D3S3 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Snx29Q9D3S3 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Snx29Q9D3S3 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC21.18■□□□□ 0.98
Snx29Q9D3S3 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC21.18■□□□□ 0.98
Snx29Q9D3S3 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Snx29Q9D3S3 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC21.18■□□□□ 0.98
Snx29Q9D3S3 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Snx29Q9D3S3 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Snx29Q9D3S3 Gm13509-201ENSMUST00000119733 1308 ntBASIC21.18■□□□□ 0.98
Snx29Q9D3S3 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Snx29Q9D3S3 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Snx29Q9D3S3 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Snx29Q9D3S3 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Snx29Q9D3S3 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Snx29Q9D3S3 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Snx29Q9D3S3 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Snx29Q9D3S3 Gm44878-201ENSMUST00000205812 1295 ntBASIC21.17■□□□□ 0.98
Snx29Q9D3S3 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Snx29Q9D3S3 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Snx29Q9D3S3 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Snx29Q9D3S3 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Snx29Q9D3S3 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Snx29Q9D3S3 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Snx29Q9D3S3 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Snx29Q9D3S3 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Snx29Q9D3S3 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Snx29Q9D3S3 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Snx29Q9D3S3 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC21.16■□□□□ 0.98
Snx29Q9D3S3 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Snx29Q9D3S3 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Snx29Q9D3S3 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Snx29Q9D3S3 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Snx29Q9D3S3 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Snx29Q9D3S3 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Snx29Q9D3S3 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC21.15■□□□□ 0.98
Snx29Q9D3S3 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Snx29Q9D3S3 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Snx29Q9D3S3 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC21.15■□□□□ 0.98
Snx29Q9D3S3 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC21.15■□□□□ 0.98
Snx29Q9D3S3 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Snx29Q9D3S3 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC21.15■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms