Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Trim13Q9CYB0 Gm43530-201ENSMUST00000195920 274 ntBASIC17.71■□□□□ 0.43
Trim13Q9CYB0 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim13Q9CYB0 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim13Q9CYB0 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim13Q9CYB0 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim13Q9CYB0 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Trim13Q9CYB0 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
Trim13Q9CYB0 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Trim13Q9CYB0 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.71■□□□□ 0.43
Trim13Q9CYB0 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim13Q9CYB0 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim13Q9CYB0 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim13Q9CYB0 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim13Q9CYB0 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Trim13Q9CYB0 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim13Q9CYB0 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim13Q9CYB0 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Trim13Q9CYB0 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC17.7■□□□□ 0.42
Trim13Q9CYB0 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC17.7■□□□□ 0.42
Trim13Q9CYB0 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Trim13Q9CYB0 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC17.7■□□□□ 0.42
Trim13Q9CYB0 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
Trim13Q9CYB0 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Trim13Q9CYB0 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim13Q9CYB0 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Trim13Q9CYB0 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim13Q9CYB0 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim13Q9CYB0 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim13Q9CYB0 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim13Q9CYB0 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim13Q9CYB0 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim13Q9CYB0 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
Trim13Q9CYB0 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.69■□□□□ 0.42
Trim13Q9CYB0 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim13Q9CYB0 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim13Q9CYB0 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim13Q9CYB0 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim13Q9CYB0 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim13Q9CYB0 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim13Q9CYB0 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim13Q9CYB0 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Trim13Q9CYB0 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Trim13Q9CYB0 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim13Q9CYB0 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
Trim13Q9CYB0 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim13Q9CYB0 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim13Q9CYB0 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim13Q9CYB0 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Trim13Q9CYB0 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim13Q9CYB0 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim13Q9CYB0 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Trim13Q9CYB0 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Trim13Q9CYB0 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC17.68■□□□□ 0.42
Trim13Q9CYB0 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim13Q9CYB0 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim13Q9CYB0 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim13Q9CYB0 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim13Q9CYB0 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim13Q9CYB0 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.67■□□□□ 0.42
Trim13Q9CYB0 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trim13Q9CYB0 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim13Q9CYB0 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim13Q9CYB0 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim13Q9CYB0 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.67■□□□□ 0.42
Trim13Q9CYB0 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.67■□□□□ 0.42
Trim13Q9CYB0 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim13Q9CYB0 Gm5522-201ENSMUST00000189483 1242 ntBASIC17.67■□□□□ 0.42
Trim13Q9CYB0 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.67■□□□□ 0.42
Trim13Q9CYB0 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim13Q9CYB0 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim13Q9CYB0 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim13Q9CYB0 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim13Q9CYB0 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trim13Q9CYB0 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trim13Q9CYB0 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim13Q9CYB0 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim13Q9CYB0 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim13Q9CYB0 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim13Q9CYB0 Gm15546-201ENSMUST00000122095 826 ntBASIC17.66■□□□□ 0.42
Trim13Q9CYB0 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC17.66■□□□□ 0.42
Trim13Q9CYB0 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Trim13Q9CYB0 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim13Q9CYB0 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim13Q9CYB0 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Trim13Q9CYB0 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim13Q9CYB0 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Trim13Q9CYB0 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim13Q9CYB0 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim13Q9CYB0 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim13Q9CYB0 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim13Q9CYB0 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim13Q9CYB0 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Trim13Q9CYB0 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Trim13Q9CYB0 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.65■□□□□ 0.42
Trim13Q9CYB0 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim13Q9CYB0 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Trim13Q9CYB0 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim13Q9CYB0 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trim13Q9CYB0 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms