Protein–RNA interactions for Protein: Q9CWY8

Rnaseh2a, Ribonuclease H2 subunit A, mousemouse

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnaseh2aQ9CWY8 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rnaseh2aQ9CWY8 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
Rnaseh2aQ9CWY8 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Rnaseh2aQ9CWY8 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC23.18■■□□□ 1.3
Rnaseh2aQ9CWY8 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Rnaseh2aQ9CWY8 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC23.18■■□□□ 1.3
Rnaseh2aQ9CWY8 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
Rnaseh2aQ9CWY8 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rnaseh2aQ9CWY8 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Rnaseh2aQ9CWY8 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rnaseh2aQ9CWY8 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
Rnaseh2aQ9CWY8 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC23.17■■□□□ 1.3
Rnaseh2aQ9CWY8 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
Rnaseh2aQ9CWY8 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC23.17■■□□□ 1.3
Rnaseh2aQ9CWY8 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC23.17■■□□□ 1.3
Rnaseh2aQ9CWY8 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
Rnaseh2aQ9CWY8 Gm18101-201ENSMUST00000215769 548 ntBASIC23.17■■□□□ 1.3
Rnaseh2aQ9CWY8 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rnaseh2aQ9CWY8 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
Rnaseh2aQ9CWY8 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rnaseh2aQ9CWY8 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rnaseh2aQ9CWY8 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Rnaseh2aQ9CWY8 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rnaseh2aQ9CWY8 Gm27032-201ENSMUST00000183124 1116 ntBASIC23.16■■□□□ 1.3
Rnaseh2aQ9CWY8 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rnaseh2aQ9CWY8 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Rnaseh2aQ9CWY8 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Rnaseh2aQ9CWY8 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Rnaseh2aQ9CWY8 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rnaseh2aQ9CWY8 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rnaseh2aQ9CWY8 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
Rnaseh2aQ9CWY8 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Rnaseh2aQ9CWY8 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rnaseh2aQ9CWY8 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
Rnaseh2aQ9CWY8 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rnaseh2aQ9CWY8 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rnaseh2aQ9CWY8 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rnaseh2aQ9CWY8 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rnaseh2aQ9CWY8 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Rnaseh2aQ9CWY8 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
Rnaseh2aQ9CWY8 Gm15847-201ENSMUST00000121417 1065 ntBASIC23.14■■□□□ 1.29
Rnaseh2aQ9CWY8 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Rnaseh2aQ9CWY8 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC23.14■■□□□ 1.29
Rnaseh2aQ9CWY8 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC23.14■■□□□ 1.29
Rnaseh2aQ9CWY8 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
Rnaseh2aQ9CWY8 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Rnaseh2aQ9CWY8 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Rnaseh2aQ9CWY8 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
Rnaseh2aQ9CWY8 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Rnaseh2aQ9CWY8 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
Rnaseh2aQ9CWY8 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rnaseh2aQ9CWY8 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rnaseh2aQ9CWY8 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rnaseh2aQ9CWY8 Alkbh1-212ENSMUST00000185301 408 ntBASIC23.13■■□□□ 1.29
Rnaseh2aQ9CWY8 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Rnaseh2aQ9CWY8 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Rnaseh2aQ9CWY8 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rnaseh2aQ9CWY8 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rnaseh2aQ9CWY8 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rnaseh2aQ9CWY8 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC23.12■■□□□ 1.29
Rnaseh2aQ9CWY8 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rnaseh2aQ9CWY8 AC163280.1-201ENSMUST00000228194 1100 ntBASIC23.12■■□□□ 1.29
Rnaseh2aQ9CWY8 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rnaseh2aQ9CWY8 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rnaseh2aQ9CWY8 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
Rnaseh2aQ9CWY8 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC23.12■■□□□ 1.29
Rnaseh2aQ9CWY8 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rnaseh2aQ9CWY8 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
Rnaseh2aQ9CWY8 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
Rnaseh2aQ9CWY8 Gm30025-201ENSMUST00000218555 728 ntBASIC23.11■■□□□ 1.29
Rnaseh2aQ9CWY8 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rnaseh2aQ9CWY8 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rnaseh2aQ9CWY8 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rnaseh2aQ9CWY8 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rnaseh2aQ9CWY8 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rnaseh2aQ9CWY8 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rnaseh2aQ9CWY8 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rnaseh2aQ9CWY8 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Rnaseh2aQ9CWY8 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rnaseh2aQ9CWY8 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Rnaseh2aQ9CWY8 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Rnaseh2aQ9CWY8 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC23.1■■□□□ 1.29
Rnaseh2aQ9CWY8 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rnaseh2aQ9CWY8 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rnaseh2aQ9CWY8 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rnaseh2aQ9CWY8 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Rnaseh2aQ9CWY8 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rnaseh2aQ9CWY8 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rnaseh2aQ9CWY8 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Rnaseh2aQ9CWY8 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Rnaseh2aQ9CWY8 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rnaseh2aQ9CWY8 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rnaseh2aQ9CWY8 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Rnaseh2aQ9CWY8 AA386476-201ENSMUST00000098781 1665 ntBASIC23.09■■□□□ 1.29
Rnaseh2aQ9CWY8 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC23.08■■□□□ 1.29
Rnaseh2aQ9CWY8 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Rnaseh2aQ9CWY8 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
Rnaseh2aQ9CWY8 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Rnaseh2aQ9CWY8 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC23.08■■□□□ 1.29
Rnaseh2aQ9CWY8 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms