Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cdh23Q99PF4 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cdh23Q99PF4 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cdh23Q99PF4 Gm27741-201ENSMUST00000185060 237 ntBASIC19.92■□□□□ 0.78
Cdh23Q99PF4 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
Cdh23Q99PF4 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC19.92■□□□□ 0.78
Cdh23Q99PF4 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Cdh23Q99PF4 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cdh23Q99PF4 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cdh23Q99PF4 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.91■□□□□ 0.78
Cdh23Q99PF4 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.91■□□□□ 0.78
Cdh23Q99PF4 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC19.91■□□□□ 0.78
Cdh23Q99PF4 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cdh23Q99PF4 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cdh23Q99PF4 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.91■□□□□ 0.78
Cdh23Q99PF4 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
Cdh23Q99PF4 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.91■□□□□ 0.78
Cdh23Q99PF4 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cdh23Q99PF4 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cdh23Q99PF4 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cdh23Q99PF4 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC19.91■□□□□ 0.78
Cdh23Q99PF4 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cdh23Q99PF4 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cdh23Q99PF4 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Cdh23Q99PF4 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cdh23Q99PF4 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cdh23Q99PF4 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cdh23Q99PF4 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cdh23Q99PF4 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.89■□□□□ 0.78
Cdh23Q99PF4 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC19.89■□□□□ 0.78
Cdh23Q99PF4 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.89■□□□□ 0.78
Cdh23Q99PF4 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cdh23Q99PF4 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cdh23Q99PF4 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cdh23Q99PF4 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cdh23Q99PF4 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cdh23Q99PF4 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Cdh23Q99PF4 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cdh23Q99PF4 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.89■□□□□ 0.77
Cdh23Q99PF4 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Cdh23Q99PF4 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Cdh23Q99PF4 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cdh23Q99PF4 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cdh23Q99PF4 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cdh23Q99PF4 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cdh23Q99PF4 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cdh23Q99PF4 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.88■□□□□ 0.77
Cdh23Q99PF4 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cdh23Q99PF4 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cdh23Q99PF4 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC19.87■□□□□ 0.77
Cdh23Q99PF4 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC19.87■□□□□ 0.77
Cdh23Q99PF4 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cdh23Q99PF4 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.87■□□□□ 0.77
Cdh23Q99PF4 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cdh23Q99PF4 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cdh23Q99PF4 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Cdh23Q99PF4 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.86■□□□□ 0.77
Cdh23Q99PF4 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cdh23Q99PF4 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cdh23Q99PF4 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cdh23Q99PF4 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cdh23Q99PF4 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC19.86■□□□□ 0.77
Cdh23Q99PF4 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cdh23Q99PF4 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cdh23Q99PF4 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cdh23Q99PF4 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC19.86■□□□□ 0.77
Cdh23Q99PF4 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cdh23Q99PF4 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cdh23Q99PF4 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Cdh23Q99PF4 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cdh23Q99PF4 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cdh23Q99PF4 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cdh23Q99PF4 Gm43799-201ENSMUST00000201845 579 ntBASIC19.85■□□□□ 0.77
Cdh23Q99PF4 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
Cdh23Q99PF4 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.85■□□□□ 0.77
Cdh23Q99PF4 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cdh23Q99PF4 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cdh23Q99PF4 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cdh23Q99PF4 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC19.84■□□□□ 0.77
Cdh23Q99PF4 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cdh23Q99PF4 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cdh23Q99PF4 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Cdh23Q99PF4 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
Cdh23Q99PF4 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cdh23Q99PF4 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cdh23Q99PF4 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cdh23Q99PF4 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cdh23Q99PF4 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
Cdh23Q99PF4 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Cdh23Q99PF4 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Cdh23Q99PF4 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Cdh23Q99PF4 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cdh23Q99PF4 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.83■□□□□ 0.76
Cdh23Q99PF4 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Cdh23Q99PF4 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cdh23Q99PF4 Gm6659-201ENSMUST00000174752 547 ntBASIC19.83■□□□□ 0.76
Cdh23Q99PF4 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cdh23Q99PF4 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cdh23Q99PF4 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.82■□□□□ 0.76
Cdh23Q99PF4 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms