Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gtf2ird2Q99NI3 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gtf2ird2Q99NI3 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gtf2ird2Q99NI3 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gtf2ird2Q99NI3 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gtf2ird2Q99NI3 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gtf2ird2Q99NI3 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.73■□□□□ 0.75
Gtf2ird2Q99NI3 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Gtf2ird2Q99NI3 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gtf2ird2Q99NI3 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gtf2ird2Q99NI3 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
Gtf2ird2Q99NI3 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gtf2ird2Q99NI3 Gm10849-201ENSMUST00000100397 618 ntBASIC19.73■□□□□ 0.75
Gtf2ird2Q99NI3 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.73■□□□□ 0.75
Gtf2ird2Q99NI3 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gtf2ird2Q99NI3 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gtf2ird2Q99NI3 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Gtf2ird2Q99NI3 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gtf2ird2Q99NI3 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gtf2ird2Q99NI3 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Gtf2ird2Q99NI3 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gtf2ird2Q99NI3 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Gtf2ird2Q99NI3 Gm42569-201ENSMUST00000200539 472 ntBASIC19.72■□□□□ 0.75
Gtf2ird2Q99NI3 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.72■□□□□ 0.75
Gtf2ird2Q99NI3 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gtf2ird2Q99NI3 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gtf2ird2Q99NI3 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gtf2ird2Q99NI3 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Gtf2ird2Q99NI3 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.71■□□□□ 0.75
Gtf2ird2Q99NI3 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Gtf2ird2Q99NI3 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gtf2ird2Q99NI3 Gm13234-201ENSMUST00000120010 747 ntBASIC19.71■□□□□ 0.75
Gtf2ird2Q99NI3 Gm26571-201ENSMUST00000181399 666 ntBASIC19.71■□□□□ 0.75
Gtf2ird2Q99NI3 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.71■□□□□ 0.75
Gtf2ird2Q99NI3 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gtf2ird2Q99NI3 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Gtf2ird2Q99NI3 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Gtf2ird2Q99NI3 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gtf2ird2Q99NI3 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Gtf2ird2Q99NI3 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gtf2ird2Q99NI3 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.71■□□□□ 0.75
Gtf2ird2Q99NI3 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Gtf2ird2Q99NI3 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Gtf2ird2Q99NI3 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gtf2ird2Q99NI3 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gtf2ird2Q99NI3 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Gtf2ird2Q99NI3 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.74
Gtf2ird2Q99NI3 Reep4-203ENSMUST00000226563 1444 ntBASIC19.7■□□□□ 0.74
Gtf2ird2Q99NI3 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Gtf2ird2Q99NI3 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gtf2ird2Q99NI3 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gtf2ird2Q99NI3 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Gtf2ird2Q99NI3 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gtf2ird2Q99NI3 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gtf2ird2Q99NI3 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.7■□□□□ 0.74
Gtf2ird2Q99NI3 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gtf2ird2Q99NI3 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gtf2ird2Q99NI3 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gtf2ird2Q99NI3 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gtf2ird2Q99NI3 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Gtf2ird2Q99NI3 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.69■□□□□ 0.74
Gtf2ird2Q99NI3 AV356131-201ENSMUST00000206201 750 ntBASIC19.69■□□□□ 0.74
Gtf2ird2Q99NI3 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gtf2ird2Q99NI3 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Gtf2ird2Q99NI3 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gtf2ird2Q99NI3 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gtf2ird2Q99NI3 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gtf2ird2Q99NI3 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Gtf2ird2Q99NI3 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gtf2ird2Q99NI3 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gtf2ird2Q99NI3 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Gtf2ird2Q99NI3 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Gtf2ird2Q99NI3 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Gtf2ird2Q99NI3 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Gtf2ird2Q99NI3 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gtf2ird2Q99NI3 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Gtf2ird2Q99NI3 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Gtf2ird2Q99NI3 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gtf2ird2Q99NI3 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gtf2ird2Q99NI3 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.67■□□□□ 0.74
Gtf2ird2Q99NI3 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.67■□□□□ 0.74
Gtf2ird2Q99NI3 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Gtf2ird2Q99NI3 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.67■□□□□ 0.74
Gtf2ird2Q99NI3 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.67■□□□□ 0.74
Gtf2ird2Q99NI3 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.67■□□□□ 0.74
Gtf2ird2Q99NI3 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gtf2ird2Q99NI3 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Gtf2ird2Q99NI3 Gm27405-201ENSMUST00000184201 112 ntBASIC19.66■□□□□ 0.74
Gtf2ird2Q99NI3 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gtf2ird2Q99NI3 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Gtf2ird2Q99NI3 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Gtf2ird2Q99NI3 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gtf2ird2Q99NI3 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.66■□□□□ 0.74
Gtf2ird2Q99NI3 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Gtf2ird2Q99NI3 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Gtf2ird2Q99NI3 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
Gtf2ird2Q99NI3 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.65■□□□□ 0.74
Gtf2ird2Q99NI3 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gtf2ird2Q99NI3 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Gtf2ird2Q99NI3 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms