Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smarcd2Q99JR8 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Smarcd2Q99JR8 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Smarcd2Q99JR8 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.53■□□□□ 0.72
Smarcd2Q99JR8 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
Smarcd2Q99JR8 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smarcd2Q99JR8 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.52■□□□□ 0.72
Smarcd2Q99JR8 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
Smarcd2Q99JR8 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Smarcd2Q99JR8 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Smarcd2Q99JR8 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
Smarcd2Q99JR8 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.52■□□□□ 0.72
Smarcd2Q99JR8 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.52■□□□□ 0.72
Smarcd2Q99JR8 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
Smarcd2Q99JR8 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
Smarcd2Q99JR8 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Smarcd2Q99JR8 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Smarcd2Q99JR8 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.51■□□□□ 0.71
Smarcd2Q99JR8 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Smarcd2Q99JR8 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
Smarcd2Q99JR8 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Smarcd2Q99JR8 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.51■□□□□ 0.71
Smarcd2Q99JR8 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Smarcd2Q99JR8 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smarcd2Q99JR8 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Smarcd2Q99JR8 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.51■□□□□ 0.71
Smarcd2Q99JR8 Rab3c-203ENSMUST00000224180 967 ntBASIC19.51■□□□□ 0.71
Smarcd2Q99JR8 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.51■□□□□ 0.71
Smarcd2Q99JR8 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Smarcd2Q99JR8 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smarcd2Q99JR8 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smarcd2Q99JR8 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Smarcd2Q99JR8 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.5■□□□□ 0.71
Smarcd2Q99JR8 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smarcd2Q99JR8 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smarcd2Q99JR8 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smarcd2Q99JR8 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Smarcd2Q99JR8 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Smarcd2Q99JR8 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smarcd2Q99JR8 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC19.5■□□□□ 0.71
Smarcd2Q99JR8 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Smarcd2Q99JR8 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19.5■□□□□ 0.71
Smarcd2Q99JR8 Gm10252-201ENSMUST00000209541 832 ntBASIC19.5■□□□□ 0.71
Smarcd2Q99JR8 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smarcd2Q99JR8 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
Smarcd2Q99JR8 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smarcd2Q99JR8 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.49■□□□□ 0.71
Smarcd2Q99JR8 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smarcd2Q99JR8 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Smarcd2Q99JR8 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smarcd2Q99JR8 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smarcd2Q99JR8 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.49■□□□□ 0.71
Smarcd2Q99JR8 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smarcd2Q99JR8 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Smarcd2Q99JR8 Trmt13-210ENSMUST00000198454 880 ntBASIC19.49■□□□□ 0.71
Smarcd2Q99JR8 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.49■□□□□ 0.71
Smarcd2Q99JR8 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.49■□□□□ 0.71
Smarcd2Q99JR8 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Smarcd2Q99JR8 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smarcd2Q99JR8 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
Smarcd2Q99JR8 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Smarcd2Q99JR8 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smarcd2Q99JR8 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smarcd2Q99JR8 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smarcd2Q99JR8 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smarcd2Q99JR8 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.48■□□□□ 0.71
Smarcd2Q99JR8 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19.48■□□□□ 0.71
Smarcd2Q99JR8 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC19.48■□□□□ 0.71
Smarcd2Q99JR8 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.48■□□□□ 0.71
Smarcd2Q99JR8 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.48■□□□□ 0.71
Smarcd2Q99JR8 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smarcd2Q99JR8 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Smarcd2Q99JR8 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smarcd2Q99JR8 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smarcd2Q99JR8 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Smarcd2Q99JR8 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Smarcd2Q99JR8 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Smarcd2Q99JR8 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Smarcd2Q99JR8 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Smarcd2Q99JR8 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.47■□□□□ 0.71
Smarcd2Q99JR8 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smarcd2Q99JR8 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Smarcd2Q99JR8 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smarcd2Q99JR8 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Smarcd2Q99JR8 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
Smarcd2Q99JR8 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smarcd2Q99JR8 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smarcd2Q99JR8 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Smarcd2Q99JR8 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smarcd2Q99JR8 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Smarcd2Q99JR8 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Smarcd2Q99JR8 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Smarcd2Q99JR8 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smarcd2Q99JR8 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Smarcd2Q99JR8 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.45■□□□□ 0.7
Smarcd2Q99JR8 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smarcd2Q99JR8 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Smarcd2Q99JR8 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Smarcd2Q99JR8 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Smarcd2Q99JR8 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms