Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdk9Q99J95 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdk9Q99J95 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.27■□□□□ 0.68
Cdk9Q99J95 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.27■□□□□ 0.68
Cdk9Q99J95 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
Cdk9Q99J95 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdk9Q99J95 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdk9Q99J95 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdk9Q99J95 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdk9Q99J95 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
Cdk9Q99J95 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Cdk9Q99J95 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cdk9Q99J95 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
Cdk9Q99J95 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.26■□□□□ 0.67
Cdk9Q99J95 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdk9Q99J95 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdk9Q99J95 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdk9Q99J95 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdk9Q99J95 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Cdk9Q99J95 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.26■□□□□ 0.67
Cdk9Q99J95 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdk9Q99J95 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.26■□□□□ 0.67
Cdk9Q99J95 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdk9Q99J95 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cdk9Q99J95 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdk9Q99J95 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cdk9Q99J95 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdk9Q99J95 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdk9Q99J95 BC021767-201ENSMUST00000126387 1716 ntBASIC19.25■□□□□ 0.67
Cdk9Q99J95 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cdk9Q99J95 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdk9Q99J95 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Cdk9Q99J95 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdk9Q99J95 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdk9Q99J95 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Cdk9Q99J95 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdk9Q99J95 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cdk9Q99J95 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cdk9Q99J95 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
Cdk9Q99J95 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdk9Q99J95 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cdk9Q99J95 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Cdk9Q99J95 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdk9Q99J95 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cdk9Q99J95 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdk9Q99J95 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cdk9Q99J95 Gm45102-201ENSMUST00000207427 857 ntBASIC19.24■□□□□ 0.67
Cdk9Q99J95 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdk9Q99J95 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdk9Q99J95 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdk9Q99J95 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.24■□□□□ 0.67
Cdk9Q99J95 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdk9Q99J95 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdk9Q99J95 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdk9Q99J95 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cdk9Q99J95 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cdk9Q99J95 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cdk9Q99J95 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdk9Q99J95 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdk9Q99J95 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdk9Q99J95 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.23■□□□□ 0.67
Cdk9Q99J95 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdk9Q99J95 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
Cdk9Q99J95 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cdk9Q99J95 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cdk9Q99J95 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdk9Q99J95 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.22■□□□□ 0.67
Cdk9Q99J95 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdk9Q99J95 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdk9Q99J95 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdk9Q99J95 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdk9Q99J95 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.22■□□□□ 0.67
Cdk9Q99J95 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.22■□□□□ 0.67
Cdk9Q99J95 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
Cdk9Q99J95 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cdk9Q99J95 Gm9959-201ENSMUST00000068277 390 ntBASIC19.22■□□□□ 0.67
Cdk9Q99J95 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdk9Q99J95 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdk9Q99J95 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Cdk9Q99J95 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Cdk9Q99J95 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Cdk9Q99J95 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdk9Q99J95 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Cdk9Q99J95 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cdk9Q99J95 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdk9Q99J95 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdk9Q99J95 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cdk9Q99J95 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Cdk9Q99J95 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdk9Q99J95 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Cdk9Q99J95 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Cdk9Q99J95 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Cdk9Q99J95 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cdk9Q99J95 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.21■□□□□ 0.67
Cdk9Q99J95 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Cdk9Q99J95 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdk9Q99J95 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdk9Q99J95 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cdk9Q99J95 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.21■□□□□ 0.67
Cdk9Q99J95 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms