Protein–RNA interactions for Protein: Q923D4

Sf3b5, Splicing factor 3B subunit 5, mousemouse

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b5Q923D4 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Sf3b5Q923D4 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sf3b5Q923D4 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Sf3b5Q923D4 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sf3b5Q923D4 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC16.94■□□□□ 0.3
Sf3b5Q923D4 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sf3b5Q923D4 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sf3b5Q923D4 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sf3b5Q923D4 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sf3b5Q923D4 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC16.94■□□□□ 0.3
Sf3b5Q923D4 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sf3b5Q923D4 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.94■□□□□ 0.3
Sf3b5Q923D4 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sf3b5Q923D4 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Sf3b5Q923D4 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sf3b5Q923D4 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Sf3b5Q923D4 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC16.94■□□□□ 0.3
Sf3b5Q923D4 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Sf3b5Q923D4 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Sf3b5Q923D4 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sf3b5Q923D4 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Sf3b5Q923D4 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
Sf3b5Q923D4 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sf3b5Q923D4 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sf3b5Q923D4 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sf3b5Q923D4 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sf3b5Q923D4 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sf3b5Q923D4 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Sf3b5Q923D4 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Sf3b5Q923D4 Gm7860-201ENSMUST00000121190 879 ntBASIC16.93■□□□□ 0.3
Sf3b5Q923D4 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC16.93■□□□□ 0.3
Sf3b5Q923D4 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sf3b5Q923D4 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC16.93■□□□□ 0.3
Sf3b5Q923D4 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sf3b5Q923D4 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Sf3b5Q923D4 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC16.93■□□□□ 0.3
Sf3b5Q923D4 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sf3b5Q923D4 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sf3b5Q923D4 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Sf3b5Q923D4 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC16.93■□□□□ 0.3
Sf3b5Q923D4 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sf3b5Q923D4 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Sf3b5Q923D4 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sf3b5Q923D4 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sf3b5Q923D4 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sf3b5Q923D4 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sf3b5Q923D4 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Sf3b5Q923D4 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sf3b5Q923D4 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sf3b5Q923D4 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Sf3b5Q923D4 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sf3b5Q923D4 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC16.92■□□□□ 0.3
Sf3b5Q923D4 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
Sf3b5Q923D4 Gm9988-201ENSMUST00000069786 435 ntBASIC16.92■□□□□ 0.3
Sf3b5Q923D4 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sf3b5Q923D4 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sf3b5Q923D4 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sf3b5Q923D4 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sf3b5Q923D4 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sf3b5Q923D4 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sf3b5Q923D4 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sf3b5Q923D4 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sf3b5Q923D4 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sf3b5Q923D4 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Sf3b5Q923D4 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sf3b5Q923D4 Notumos-201ENSMUST00000151998 2659 ntBASIC16.92■□□□□ 0.3
Sf3b5Q923D4 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sf3b5Q923D4 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC16.91■□□□□ 0.3
Sf3b5Q923D4 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sf3b5Q923D4 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sf3b5Q923D4 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sf3b5Q923D4 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sf3b5Q923D4 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC16.91■□□□□ 0.3
Sf3b5Q923D4 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sf3b5Q923D4 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Sf3b5Q923D4 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sf3b5Q923D4 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sf3b5Q923D4 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sf3b5Q923D4 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.91■□□□□ 0.3
Sf3b5Q923D4 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Sf3b5Q923D4 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sf3b5Q923D4 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sf3b5Q923D4 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sf3b5Q923D4 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sf3b5Q923D4 Golph3-202ENSMUST00000226517 2359 ntBASIC16.91■□□□□ 0.3
Sf3b5Q923D4 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sf3b5Q923D4 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sf3b5Q923D4 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sf3b5Q923D4 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC16.9■□□□□ 0.3
Sf3b5Q923D4 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC16.9■□□□□ 0.3
Sf3b5Q923D4 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sf3b5Q923D4 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Sf3b5Q923D4 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sf3b5Q923D4 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Sf3b5Q923D4 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sf3b5Q923D4 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sf3b5Q923D4 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sf3b5Q923D4 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
Sf3b5Q923D4 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.9■□□□□ 0.3
Sf3b5Q923D4 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms