Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdha8Q91Y12 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdha8Q91Y12 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdha8Q91Y12 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdha8Q91Y12 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Pcdha8Q91Y12 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pcdha8Q91Y12 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Pcdha8Q91Y12 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdha8Q91Y12 Gm43173-201ENSMUST00000202246 593 ntBASIC18.64■□□□□ 0.57
Pcdha8Q91Y12 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdha8Q91Y12 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdha8Q91Y12 Golph3-205ENSMUST00000228671 2842 ntBASIC18.64■□□□□ 0.57
Pcdha8Q91Y12 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdha8Q91Y12 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdha8Q91Y12 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pcdha8Q91Y12 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.64■□□□□ 0.57
Pcdha8Q91Y12 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.63■□□□□ 0.57
Pcdha8Q91Y12 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.63■□□□□ 0.57
Pcdha8Q91Y12 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.63■□□□□ 0.57
Pcdha8Q91Y12 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdha8Q91Y12 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdha8Q91Y12 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdha8Q91Y12 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.63■□□□□ 0.57
Pcdha8Q91Y12 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdha8Q91Y12 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdha8Q91Y12 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Pcdha8Q91Y12 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdha8Q91Y12 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.63■□□□□ 0.57
Pcdha8Q91Y12 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdha8Q91Y12 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pcdha8Q91Y12 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdha8Q91Y12 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdha8Q91Y12 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdha8Q91Y12 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdha8Q91Y12 Gm6139-201ENSMUST00000079261 882 ntBASIC18.62■□□□□ 0.57
Pcdha8Q91Y12 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.62■□□□□ 0.57
Pcdha8Q91Y12 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdha8Q91Y12 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdha8Q91Y12 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.62■□□□□ 0.57
Pcdha8Q91Y12 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdha8Q91Y12 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pcdha8Q91Y12 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdha8Q91Y12 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdha8Q91Y12 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdha8Q91Y12 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdha8Q91Y12 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdha8Q91Y12 Gm20100-201ENSMUST00000209418 2272 ntBASIC18.61■□□□□ 0.57
Pcdha8Q91Y12 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pcdha8Q91Y12 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Pcdha8Q91Y12 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Pcdha8Q91Y12 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdha8Q91Y12 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdha8Q91Y12 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdha8Q91Y12 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdha8Q91Y12 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
Pcdha8Q91Y12 Smad6-203ENSMUST00000179458 273 ntBASIC18.6■□□□□ 0.57
Pcdha8Q91Y12 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdha8Q91Y12 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
Pcdha8Q91Y12 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.6■□□□□ 0.57
Pcdha8Q91Y12 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdha8Q91Y12 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdha8Q91Y12 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdha8Q91Y12 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pcdha8Q91Y12 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdha8Q91Y12 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdha8Q91Y12 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdha8Q91Y12 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdha8Q91Y12 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pcdha8Q91Y12 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.59■□□□□ 0.57
Pcdha8Q91Y12 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Pcdha8Q91Y12 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdha8Q91Y12 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Pcdha8Q91Y12 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pcdha8Q91Y12 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.58■□□□□ 0.56
Pcdha8Q91Y12 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18.58■□□□□ 0.56
Pcdha8Q91Y12 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.58■□□□□ 0.56
Pcdha8Q91Y12 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdha8Q91Y12 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC18.58■□□□□ 0.56
Pcdha8Q91Y12 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdha8Q91Y12 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Pcdha8Q91Y12 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdha8Q91Y12 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdha8Q91Y12 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC18.58■□□□□ 0.56
Pcdha8Q91Y12 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdha8Q91Y12 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdha8Q91Y12 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pcdha8Q91Y12 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdha8Q91Y12 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdha8Q91Y12 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdha8Q91Y12 Gm11421-201ENSMUST00000122124 294 ntBASIC18.57■□□□□ 0.56
Pcdha8Q91Y12 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdha8Q91Y12 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pcdha8Q91Y12 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Pcdha8Q91Y12 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdha8Q91Y12 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdha8Q91Y12 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdha8Q91Y12 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdha8Q91Y12 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pcdha8Q91Y12 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.56■□□□□ 0.56
Pcdha8Q91Y12 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms