Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdha9Q91Y11 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdha9Q91Y11 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdha9Q91Y11 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pcdha9Q91Y11 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.87
Pcdha9Q91Y11 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Pcdha9Q91Y11 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdha9Q91Y11 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdha9Q91Y11 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdha9Q91Y11 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdha9Q91Y11 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdha9Q91Y11 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdha9Q91Y11 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.45■□□□□ 0.86
Pcdha9Q91Y11 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Pcdha9Q91Y11 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pcdha9Q91Y11 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
Pcdha9Q91Y11 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdha9Q91Y11 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdha9Q91Y11 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.44■□□□□ 0.86
Pcdha9Q91Y11 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.44■□□□□ 0.86
Pcdha9Q91Y11 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Pcdha9Q91Y11 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
Pcdha9Q91Y11 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.44■□□□□ 0.86
Pcdha9Q91Y11 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdha9Q91Y11 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.44■□□□□ 0.86
Pcdha9Q91Y11 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.44■□□□□ 0.86
Pcdha9Q91Y11 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdha9Q91Y11 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdha9Q91Y11 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.44■□□□□ 0.86
Pcdha9Q91Y11 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdha9Q91Y11 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdha9Q91Y11 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.44■□□□□ 0.86
Pcdha9Q91Y11 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Pcdha9Q91Y11 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Pcdha9Q91Y11 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdha9Q91Y11 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdha9Q91Y11 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdha9Q91Y11 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdha9Q91Y11 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdha9Q91Y11 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdha9Q91Y11 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdha9Q91Y11 Gm10493-201ENSMUST00000097270 612 ntBASIC20.43■□□□□ 0.86
Pcdha9Q91Y11 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdha9Q91Y11 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdha9Q91Y11 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdha9Q91Y11 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Pcdha9Q91Y11 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdha9Q91Y11 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Pcdha9Q91Y11 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdha9Q91Y11 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Pcdha9Q91Y11 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Pcdha9Q91Y11 Gm7860-201ENSMUST00000121190 879 ntBASIC20.42■□□□□ 0.86
Pcdha9Q91Y11 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.42■□□□□ 0.86
Pcdha9Q91Y11 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdha9Q91Y11 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.42■□□□□ 0.86
Pcdha9Q91Y11 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdha9Q91Y11 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdha9Q91Y11 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdha9Q91Y11 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdha9Q91Y11 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdha9Q91Y11 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdha9Q91Y11 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Pcdha9Q91Y11 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdha9Q91Y11 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdha9Q91Y11 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdha9Q91Y11 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdha9Q91Y11 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdha9Q91Y11 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.41■□□□□ 0.86
Pcdha9Q91Y11 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdha9Q91Y11 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdha9Q91Y11 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdha9Q91Y11 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdha9Q91Y11 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdha9Q91Y11 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Pcdha9Q91Y11 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdha9Q91Y11 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdha9Q91Y11 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdha9Q91Y11 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdha9Q91Y11 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdha9Q91Y11 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.4■□□□□ 0.86
Pcdha9Q91Y11 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.4■□□□□ 0.86
Pcdha9Q91Y11 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.4■□□□□ 0.86
Pcdha9Q91Y11 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Pcdha9Q91Y11 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.4■□□□□ 0.86
Pcdha9Q91Y11 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdha9Q91Y11 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
Pcdha9Q91Y11 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdha9Q91Y11 Gm9988-201ENSMUST00000069786 435 ntBASIC20.4■□□□□ 0.86
Pcdha9Q91Y11 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdha9Q91Y11 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdha9Q91Y11 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pcdha9Q91Y11 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.39■□□□□ 0.86
Pcdha9Q91Y11 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pcdha9Q91Y11 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdha9Q91Y11 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.39■□□□□ 0.85
Pcdha9Q91Y11 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdha9Q91Y11 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.39■□□□□ 0.85
Pcdha9Q91Y11 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdha9Q91Y11 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Pcdha9Q91Y11 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms