Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Pcdhb5Q91XZ5 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC22.73■■□□□ 1.23
Pcdhb5Q91XZ5 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Pcdhb5Q91XZ5 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Pcdhb5Q91XZ5 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
Pcdhb5Q91XZ5 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
Pcdhb5Q91XZ5 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
Pcdhb5Q91XZ5 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Pcdhb5Q91XZ5 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
Pcdhb5Q91XZ5 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Pcdhb5Q91XZ5 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Pcdhb5Q91XZ5 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Pcdhb5Q91XZ5 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Pcdhb5Q91XZ5 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Pcdhb5Q91XZ5 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Pcdhb5Q91XZ5 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Pcdhb5Q91XZ5 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
Pcdhb5Q91XZ5 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Pcdhb5Q91XZ5 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC22.73■■□□□ 1.23
Pcdhb5Q91XZ5 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Pcdhb5Q91XZ5 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC22.73■■□□□ 1.23
Pcdhb5Q91XZ5 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdhb5Q91XZ5 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC22.72■■□□□ 1.23
Pcdhb5Q91XZ5 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdhb5Q91XZ5 Gm27032-201ENSMUST00000183124 1116 ntBASIC22.72■■□□□ 1.23
Pcdhb5Q91XZ5 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdhb5Q91XZ5 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
Pcdhb5Q91XZ5 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdhb5Q91XZ5 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC22.72■■□□□ 1.23
Pcdhb5Q91XZ5 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdhb5Q91XZ5 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdhb5Q91XZ5 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Pcdhb5Q91XZ5 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Pcdhb5Q91XZ5 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Pcdhb5Q91XZ5 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
Pcdhb5Q91XZ5 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC22.71■■□□□ 1.23
Pcdhb5Q91XZ5 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Pcdhb5Q91XZ5 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC22.71■■□□□ 1.23
Pcdhb5Q91XZ5 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Pcdhb5Q91XZ5 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC22.71■■□□□ 1.23
Pcdhb5Q91XZ5 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
Pcdhb5Q91XZ5 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
Pcdhb5Q91XZ5 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC22.71■■□□□ 1.23
Pcdhb5Q91XZ5 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.23
Pcdhb5Q91XZ5 Gm20100-201ENSMUST00000209418 2272 ntBASIC22.7■■□□□ 1.22
Pcdhb5Q91XZ5 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC22.7■■□□□ 1.22
Pcdhb5Q91XZ5 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC22.7■■□□□ 1.22
Pcdhb5Q91XZ5 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC22.7■■□□□ 1.22
Pcdhb5Q91XZ5 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Pcdhb5Q91XZ5 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Pcdhb5Q91XZ5 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC22.69■■□□□ 1.22
Pcdhb5Q91XZ5 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdhb5Q91XZ5 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdhb5Q91XZ5 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdhb5Q91XZ5 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdhb5Q91XZ5 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC22.69■■□□□ 1.22
Pcdhb5Q91XZ5 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdhb5Q91XZ5 AC131586.2-201ENSMUST00000228370 1512 ntBASIC22.69■■□□□ 1.22
Pcdhb5Q91XZ5 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdhb5Q91XZ5 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC22.69■■□□□ 1.22
Pcdhb5Q91XZ5 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdhb5Q91XZ5 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdhb5Q91XZ5 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Pcdhb5Q91XZ5 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
Pcdhb5Q91XZ5 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Pcdhb5Q91XZ5 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Pcdhb5Q91XZ5 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Pcdhb5Q91XZ5 Gm22240-201ENSMUST00000175225 82 ntBASIC22.68■■□□□ 1.22
Pcdhb5Q91XZ5 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC22.68■■□□□ 1.22
Pcdhb5Q91XZ5 Gm20049-201ENSMUST00000219950 730 ntBASIC22.68■■□□□ 1.22
Pcdhb5Q91XZ5 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
Pcdhb5Q91XZ5 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Pcdhb5Q91XZ5 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
Pcdhb5Q91XZ5 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Pcdhb5Q91XZ5 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC22.68■■□□□ 1.22
Pcdhb5Q91XZ5 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Pcdhb5Q91XZ5 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Pcdhb5Q91XZ5 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
Pcdhb5Q91XZ5 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pcdhb5Q91XZ5 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
Pcdhb5Q91XZ5 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
Pcdhb5Q91XZ5 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC22.67■■□□□ 1.22
Pcdhb5Q91XZ5 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Pcdhb5Q91XZ5 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC22.67■■□□□ 1.22
Pcdhb5Q91XZ5 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Pcdhb5Q91XZ5 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Pcdhb5Q91XZ5 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdhb5Q91XZ5 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdhb5Q91XZ5 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdhb5Q91XZ5 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
Pcdhb5Q91XZ5 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
Pcdhb5Q91XZ5 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Pcdhb5Q91XZ5 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
Pcdhb5Q91XZ5 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
Pcdhb5Q91XZ5 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Pcdhb5Q91XZ5 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
Pcdhb5Q91XZ5 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Pcdhb5Q91XZ5 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC22.65■■□□□ 1.22
Pcdhb5Q91XZ5 Gm8520-201ENSMUST00000186517 868 ntBASIC22.65■■□□□ 1.22
Pcdhb5Q91XZ5 AC122769.4-201ENSMUST00000228166 901 ntBASIC22.65■■□□□ 1.22
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms