Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhga9Q91XX9 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Pcdhga9Q91XX9 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhga9Q91XX9 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pcdhga9Q91XX9 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.99■□□□□ 0.63
Pcdhga9Q91XX9 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhga9Q91XX9 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhga9Q91XX9 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhga9Q91XX9 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.98■□□□□ 0.63
Pcdhga9Q91XX9 Gm27801-201ENSMUST00000184174 223 ntBASIC18.98■□□□□ 0.63
Pcdhga9Q91XX9 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhga9Q91XX9 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhga9Q91XX9 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhga9Q91XX9 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pcdhga9Q91XX9 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.98■□□□□ 0.63
Pcdhga9Q91XX9 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhga9Q91XX9 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhga9Q91XX9 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhga9Q91XX9 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.97■□□□□ 0.63
Pcdhga9Q91XX9 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhga9Q91XX9 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhga9Q91XX9 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhga9Q91XX9 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhga9Q91XX9 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhga9Q91XX9 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhga9Q91XX9 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhga9Q91XX9 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhga9Q91XX9 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Pcdhga9Q91XX9 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhga9Q91XX9 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhga9Q91XX9 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.96■□□□□ 0.63
Pcdhga9Q91XX9 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Pcdhga9Q91XX9 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Pcdhga9Q91XX9 Gm26571-201ENSMUST00000181399 666 ntBASIC18.96■□□□□ 0.63
Pcdhga9Q91XX9 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhga9Q91XX9 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhga9Q91XX9 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhga9Q91XX9 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhga9Q91XX9 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhga9Q91XX9 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhga9Q91XX9 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Pcdhga9Q91XX9 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhga9Q91XX9 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhga9Q91XX9 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhga9Q91XX9 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhga9Q91XX9 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhga9Q91XX9 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhga9Q91XX9 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Pcdhga9Q91XX9 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhga9Q91XX9 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhga9Q91XX9 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhga9Q91XX9 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.94■□□□□ 0.62
Pcdhga9Q91XX9 Gm27405-201ENSMUST00000184201 112 ntBASIC18.94■□□□□ 0.62
Pcdhga9Q91XX9 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhga9Q91XX9 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.94■□□□□ 0.62
Pcdhga9Q91XX9 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Pcdhga9Q91XX9 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Pcdhga9Q91XX9 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC18.94■□□□□ 0.62
Pcdhga9Q91XX9 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhga9Q91XX9 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhga9Q91XX9 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhga9Q91XX9 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhga9Q91XX9 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhga9Q91XX9 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhga9Q91XX9 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhga9Q91XX9 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhga9Q91XX9 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhga9Q91XX9 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhga9Q91XX9 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhga9Q91XX9 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhga9Q91XX9 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhga9Q91XX9 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhga9Q91XX9 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhga9Q91XX9 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Pcdhga9Q91XX9 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhga9Q91XX9 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
Pcdhga9Q91XX9 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.92■□□□□ 0.62
Pcdhga9Q91XX9 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhga9Q91XX9 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pcdhga9Q91XX9 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
Pcdhga9Q91XX9 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhga9Q91XX9 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Pcdhga9Q91XX9 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhga9Q91XX9 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Pcdhga9Q91XX9 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhga9Q91XX9 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Pcdhga9Q91XX9 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Pcdhga9Q91XX9 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.91■□□□□ 0.62
Pcdhga9Q91XX9 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.91■□□□□ 0.62
Pcdhga9Q91XX9 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Pcdhga9Q91XX9 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Pcdhga9Q91XX9 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.9■□□□□ 0.62
Pcdhga9Q91XX9 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.9■□□□□ 0.62
Pcdhga9Q91XX9 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.9■□□□□ 0.62
Pcdhga9Q91XX9 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.9■□□□□ 0.62
Pcdhga9Q91XX9 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhga9Q91XX9 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhga9Q91XX9 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhga9Q91XX9 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Pcdhga9Q91XX9 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms