Protein–RNA interactions for Protein: Q91XD2

Lims2, LIM and senescent cell antigen-like-containing domain protein 2, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims2Q91XD2 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lims2Q91XD2 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lims2Q91XD2 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lims2Q91XD2 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Lims2Q91XD2 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Lims2Q91XD2 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Lims2Q91XD2 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lims2Q91XD2 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Lims2Q91XD2 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lims2Q91XD2 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lims2Q91XD2 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Lims2Q91XD2 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
Lims2Q91XD2 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lims2Q91XD2 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lims2Q91XD2 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lims2Q91XD2 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lims2Q91XD2 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Lims2Q91XD2 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Lims2Q91XD2 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Lims2Q91XD2 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.77■□□□□ 0.76
Lims2Q91XD2 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Lims2Q91XD2 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.77■□□□□ 0.76
Lims2Q91XD2 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Lims2Q91XD2 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Lims2Q91XD2 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Lims2Q91XD2 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lims2Q91XD2 Golph3-202ENSMUST00000226517 2359 ntBASIC19.76■□□□□ 0.75
Lims2Q91XD2 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lims2Q91XD2 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lims2Q91XD2 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lims2Q91XD2 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.76■□□□□ 0.75
Lims2Q91XD2 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Lims2Q91XD2 Gm37179-201ENSMUST00000194862 823 ntBASIC19.76■□□□□ 0.75
Lims2Q91XD2 Gm7514-201ENSMUST00000209475 934 ntBASIC19.76■□□□□ 0.75
Lims2Q91XD2 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lims2Q91XD2 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Lims2Q91XD2 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lims2Q91XD2 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.76■□□□□ 0.75
Lims2Q91XD2 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.76■□□□□ 0.75
Lims2Q91XD2 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Lims2Q91XD2 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Lims2Q91XD2 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.75■□□□□ 0.75
Lims2Q91XD2 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lims2Q91XD2 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Lims2Q91XD2 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Lims2Q91XD2 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Lims2Q91XD2 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Lims2Q91XD2 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lims2Q91XD2 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lims2Q91XD2 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Lims2Q91XD2 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lims2Q91XD2 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lims2Q91XD2 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Lims2Q91XD2 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lims2Q91XD2 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Lims2Q91XD2 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lims2Q91XD2 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Lims2Q91XD2 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Lims2Q91XD2 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Lims2Q91XD2 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Lims2Q91XD2 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.73■□□□□ 0.75
Lims2Q91XD2 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Lims2Q91XD2 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Lims2Q91XD2 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lims2Q91XD2 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Lims2Q91XD2 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.72■□□□□ 0.75
Lims2Q91XD2 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Lims2Q91XD2 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.72■□□□□ 0.75
Lims2Q91XD2 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Lims2Q91XD2 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lims2Q91XD2 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lims2Q91XD2 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lims2Q91XD2 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lims2Q91XD2 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Lims2Q91XD2 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.72■□□□□ 0.75
Lims2Q91XD2 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lims2Q91XD2 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lims2Q91XD2 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lims2Q91XD2 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Lims2Q91XD2 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.71■□□□□ 0.75
Lims2Q91XD2 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lims2Q91XD2 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Lims2Q91XD2 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lims2Q91XD2 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Lims2Q91XD2 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lims2Q91XD2 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lims2Q91XD2 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Lims2Q91XD2 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Lims2Q91XD2 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lims2Q91XD2 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lims2Q91XD2 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Lims2Q91XD2 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Lims2Q91XD2 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lims2Q91XD2 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lims2Q91XD2 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Lims2Q91XD2 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.69■□□□□ 0.74
Lims2Q91XD2 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC19.69■□□□□ 0.74
Lims2Q91XD2 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Lims2Q91XD2 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Lims2Q91XD2 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms