Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Vsx1Q91V10 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vsx1Q91V10 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Vsx1Q91V10 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Vsx1Q91V10 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vsx1Q91V10 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Vsx1Q91V10 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Vsx1Q91V10 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vsx1Q91V10 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC19.01■□□□□ 0.63
Vsx1Q91V10 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.01■□□□□ 0.63
Vsx1Q91V10 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.01■□□□□ 0.63
Vsx1Q91V10 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Vsx1Q91V10 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vsx1Q91V10 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Vsx1Q91V10 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Vsx1Q91V10 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19■□□□□ 0.63
Vsx1Q91V10 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Vsx1Q91V10 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Vsx1Q91V10 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Vsx1Q91V10 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Vsx1Q91V10 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC19■□□□□ 0.63
Vsx1Q91V10 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19■□□□□ 0.63
Vsx1Q91V10 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Vsx1Q91V10 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Vsx1Q91V10 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19■□□□□ 0.63
Vsx1Q91V10 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19■□□□□ 0.63
Vsx1Q91V10 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Vsx1Q91V10 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Vsx1Q91V10 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Vsx1Q91V10 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Vsx1Q91V10 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Vsx1Q91V10 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.99■□□□□ 0.63
Vsx1Q91V10 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vsx1Q91V10 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Vsx1Q91V10 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vsx1Q91V10 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.99■□□□□ 0.63
Vsx1Q91V10 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Vsx1Q91V10 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vsx1Q91V10 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Vsx1Q91V10 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Vsx1Q91V10 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.98■□□□□ 0.63
Vsx1Q91V10 Gm5913-201ENSMUST00000119397 1399 ntBASIC18.98■□□□□ 0.63
Vsx1Q91V10 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vsx1Q91V10 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vsx1Q91V10 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Vsx1Q91V10 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Vsx1Q91V10 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vsx1Q91V10 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Vsx1Q91V10 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vsx1Q91V10 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vsx1Q91V10 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
Vsx1Q91V10 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vsx1Q91V10 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Vsx1Q91V10 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Vsx1Q91V10 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vsx1Q91V10 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Vsx1Q91V10 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vsx1Q91V10 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vsx1Q91V10 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vsx1Q91V10 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vsx1Q91V10 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Vsx1Q91V10 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vsx1Q91V10 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.97■□□□□ 0.63
Vsx1Q91V10 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vsx1Q91V10 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vsx1Q91V10 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.97■□□□□ 0.63
Vsx1Q91V10 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vsx1Q91V10 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vsx1Q91V10 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Vsx1Q91V10 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vsx1Q91V10 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Vsx1Q91V10 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vsx1Q91V10 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vsx1Q91V10 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vsx1Q91V10 Gm13534-201ENSMUST00000121169 513 ntBASIC18.96■□□□□ 0.63
Vsx1Q91V10 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.96■□□□□ 0.63
Vsx1Q91V10 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Vsx1Q91V10 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vsx1Q91V10 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vsx1Q91V10 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Vsx1Q91V10 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Vsx1Q91V10 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Vsx1Q91V10 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Vsx1Q91V10 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Vsx1Q91V10 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vsx1Q91V10 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Vsx1Q91V10 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Vsx1Q91V10 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.95■□□□□ 0.62
Vsx1Q91V10 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Vsx1Q91V10 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.95■□□□□ 0.62
Vsx1Q91V10 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vsx1Q91V10 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vsx1Q91V10 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Vsx1Q91V10 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vsx1Q91V10 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.95■□□□□ 0.62
Vsx1Q91V10 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Vsx1Q91V10 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Vsx1Q91V10 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
Vsx1Q91V10 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Vsx1Q91V10 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms