Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vps4aQ8VEJ9 Gm42569-201ENSMUST00000200539 472 ntBASIC18.53■□□□□ 0.56
Vps4aQ8VEJ9 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vps4aQ8VEJ9 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Vps4aQ8VEJ9 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vps4aQ8VEJ9 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vps4aQ8VEJ9 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.53■□□□□ 0.56
Vps4aQ8VEJ9 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Vps4aQ8VEJ9 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Vps4aQ8VEJ9 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Vps4aQ8VEJ9 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Vps4aQ8VEJ9 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Vps4aQ8VEJ9 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vps4aQ8VEJ9 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.52■□□□□ 0.56
Vps4aQ8VEJ9 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vps4aQ8VEJ9 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vps4aQ8VEJ9 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Vps4aQ8VEJ9 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Vps4aQ8VEJ9 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vps4aQ8VEJ9 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vps4aQ8VEJ9 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Vps4aQ8VEJ9 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.52■□□□□ 0.56
Vps4aQ8VEJ9 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Vps4aQ8VEJ9 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.52■□□□□ 0.56
Vps4aQ8VEJ9 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Vps4aQ8VEJ9 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Vps4aQ8VEJ9 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Vps4aQ8VEJ9 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vps4aQ8VEJ9 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Vps4aQ8VEJ9 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vps4aQ8VEJ9 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
Vps4aQ8VEJ9 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vps4aQ8VEJ9 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vps4aQ8VEJ9 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
Vps4aQ8VEJ9 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.51■□□□□ 0.55
Vps4aQ8VEJ9 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.51■□□□□ 0.55
Vps4aQ8VEJ9 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.51■□□□□ 0.55
Vps4aQ8VEJ9 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.51■□□□□ 0.55
Vps4aQ8VEJ9 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Vps4aQ8VEJ9 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vps4aQ8VEJ9 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.51■□□□□ 0.55
Vps4aQ8VEJ9 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vps4aQ8VEJ9 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vps4aQ8VEJ9 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Vps4aQ8VEJ9 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vps4aQ8VEJ9 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Vps4aQ8VEJ9 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Vps4aQ8VEJ9 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.5■□□□□ 0.55
Vps4aQ8VEJ9 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Vps4aQ8VEJ9 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vps4aQ8VEJ9 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Vps4aQ8VEJ9 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Vps4aQ8VEJ9 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vps4aQ8VEJ9 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Vps4aQ8VEJ9 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Vps4aQ8VEJ9 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.5■□□□□ 0.55
Vps4aQ8VEJ9 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Vps4aQ8VEJ9 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vps4aQ8VEJ9 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vps4aQ8VEJ9 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vps4aQ8VEJ9 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vps4aQ8VEJ9 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vps4aQ8VEJ9 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.49■□□□□ 0.55
Vps4aQ8VEJ9 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Vps4aQ8VEJ9 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vps4aQ8VEJ9 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Vps4aQ8VEJ9 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Vps4aQ8VEJ9 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vps4aQ8VEJ9 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Vps4aQ8VEJ9 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vps4aQ8VEJ9 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vps4aQ8VEJ9 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Vps4aQ8VEJ9 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vps4aQ8VEJ9 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Vps4aQ8VEJ9 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.48■□□□□ 0.55
Vps4aQ8VEJ9 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vps4aQ8VEJ9 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vps4aQ8VEJ9 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.48■□□□□ 0.55
Vps4aQ8VEJ9 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vps4aQ8VEJ9 Gm27405-201ENSMUST00000184201 112 ntBASIC18.48■□□□□ 0.55
Vps4aQ8VEJ9 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.48■□□□□ 0.55
Vps4aQ8VEJ9 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vps4aQ8VEJ9 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vps4aQ8VEJ9 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Vps4aQ8VEJ9 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Vps4aQ8VEJ9 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Vps4aQ8VEJ9 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vps4aQ8VEJ9 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Vps4aQ8VEJ9 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vps4aQ8VEJ9 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Vps4aQ8VEJ9 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Vps4aQ8VEJ9 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vps4aQ8VEJ9 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.47■□□□□ 0.55
Vps4aQ8VEJ9 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.47■□□□□ 0.55
Vps4aQ8VEJ9 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Vps4aQ8VEJ9 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Vps4aQ8VEJ9 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Vps4aQ8VEJ9 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Vps4aQ8VEJ9 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.46■□□□□ 0.55
Vps4aQ8VEJ9 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms