Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rpa1Q8VEE4 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.3■□□□□ 0.68
Rpa1Q8VEE4 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Rpa1Q8VEE4 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Rpa1Q8VEE4 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Rpa1Q8VEE4 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
Rpa1Q8VEE4 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rpa1Q8VEE4 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.29■□□□□ 0.68
Rpa1Q8VEE4 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.29■□□□□ 0.68
Rpa1Q8VEE4 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rpa1Q8VEE4 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.29■□□□□ 0.68
Rpa1Q8VEE4 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
Rpa1Q8VEE4 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rpa1Q8VEE4 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rpa1Q8VEE4 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.29■□□□□ 0.68
Rpa1Q8VEE4 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rpa1Q8VEE4 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rpa1Q8VEE4 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rpa1Q8VEE4 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Rpa1Q8VEE4 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rpa1Q8VEE4 Rncr4-201ENSMUST00000194541 2234 ntBASIC19.28■□□□□ 0.68
Rpa1Q8VEE4 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rpa1Q8VEE4 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rpa1Q8VEE4 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Rpa1Q8VEE4 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Rpa1Q8VEE4 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.28■□□□□ 0.68
Rpa1Q8VEE4 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Rpa1Q8VEE4 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Rpa1Q8VEE4 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.28■□□□□ 0.68
Rpa1Q8VEE4 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rpa1Q8VEE4 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rpa1Q8VEE4 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rpa1Q8VEE4 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rpa1Q8VEE4 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rpa1Q8VEE4 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Rpa1Q8VEE4 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rpa1Q8VEE4 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rpa1Q8VEE4 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rpa1Q8VEE4 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rpa1Q8VEE4 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.27■□□□□ 0.68
Rpa1Q8VEE4 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rpa1Q8VEE4 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rpa1Q8VEE4 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rpa1Q8VEE4 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rpa1Q8VEE4 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rpa1Q8VEE4 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rpa1Q8VEE4 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rpa1Q8VEE4 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.26■□□□□ 0.67
Rpa1Q8VEE4 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rpa1Q8VEE4 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Rpa1Q8VEE4 Gm43530-201ENSMUST00000195920 274 ntBASIC19.26■□□□□ 0.67
Rpa1Q8VEE4 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rpa1Q8VEE4 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rpa1Q8VEE4 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rpa1Q8VEE4 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Rpa1Q8VEE4 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rpa1Q8VEE4 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rpa1Q8VEE4 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Rpa1Q8VEE4 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rpa1Q8VEE4 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.25■□□□□ 0.67
Rpa1Q8VEE4 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Rpa1Q8VEE4 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rpa1Q8VEE4 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rpa1Q8VEE4 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rpa1Q8VEE4 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC19.25■□□□□ 0.67
Rpa1Q8VEE4 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rpa1Q8VEE4 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Rpa1Q8VEE4 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.24■□□□□ 0.67
Rpa1Q8VEE4 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rpa1Q8VEE4 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rpa1Q8VEE4 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rpa1Q8VEE4 AA386476-201ENSMUST00000098781 1665 ntBASIC19.24■□□□□ 0.67
Rpa1Q8VEE4 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rpa1Q8VEE4 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rpa1Q8VEE4 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rpa1Q8VEE4 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rpa1Q8VEE4 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.24■□□□□ 0.67
Rpa1Q8VEE4 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Rpa1Q8VEE4 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rpa1Q8VEE4 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rpa1Q8VEE4 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Rpa1Q8VEE4 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.24■□□□□ 0.67
Rpa1Q8VEE4 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rpa1Q8VEE4 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rpa1Q8VEE4 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rpa1Q8VEE4 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rpa1Q8VEE4 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.23■□□□□ 0.67
Rpa1Q8VEE4 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rpa1Q8VEE4 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rpa1Q8VEE4 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Rpa1Q8VEE4 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.23■□□□□ 0.67
Rpa1Q8VEE4 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Rpa1Q8VEE4 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rpa1Q8VEE4 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.23■□□□□ 0.67
Rpa1Q8VEE4 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rpa1Q8VEE4 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Rpa1Q8VEE4 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Rpa1Q8VEE4 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Rpa1Q8VEE4 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rpa1Q8VEE4 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms