Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sh3kbp1Q8R550 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Sh3kbp1Q8R550 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sh3kbp1Q8R550 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sh3kbp1Q8R550 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sh3kbp1Q8R550 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
Sh3kbp1Q8R550 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Sh3kbp1Q8R550 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Sh3kbp1Q8R550 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.78■□□□□ 0.76
Sh3kbp1Q8R550 AC137127.1-201ENSMUST00000213466 1078 ntBASIC19.78■□□□□ 0.76
Sh3kbp1Q8R550 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Sh3kbp1Q8R550 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sh3kbp1Q8R550 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Sh3kbp1Q8R550 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Sh3kbp1Q8R550 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.77■□□□□ 0.76
Sh3kbp1Q8R550 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Sh3kbp1Q8R550 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sh3kbp1Q8R550 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Sh3kbp1Q8R550 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.77■□□□□ 0.76
Sh3kbp1Q8R550 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Sh3kbp1Q8R550 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Sh3kbp1Q8R550 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sh3kbp1Q8R550 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sh3kbp1Q8R550 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Sh3kbp1Q8R550 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.76■□□□□ 0.75
Sh3kbp1Q8R550 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Sh3kbp1Q8R550 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Sh3kbp1Q8R550 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sh3kbp1Q8R550 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sh3kbp1Q8R550 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
Sh3kbp1Q8R550 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Sh3kbp1Q8R550 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sh3kbp1Q8R550 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Sh3kbp1Q8R550 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sh3kbp1Q8R550 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sh3kbp1Q8R550 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.75■□□□□ 0.75
Sh3kbp1Q8R550 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.75■□□□□ 0.75
Sh3kbp1Q8R550 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.75■□□□□ 0.75
Sh3kbp1Q8R550 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.75■□□□□ 0.75
Sh3kbp1Q8R550 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sh3kbp1Q8R550 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sh3kbp1Q8R550 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sh3kbp1Q8R550 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Sh3kbp1Q8R550 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Sh3kbp1Q8R550 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sh3kbp1Q8R550 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
Sh3kbp1Q8R550 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sh3kbp1Q8R550 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sh3kbp1Q8R550 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.74■□□□□ 0.75
Sh3kbp1Q8R550 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Sh3kbp1Q8R550 Gm9988-201ENSMUST00000069786 435 ntBASIC19.74■□□□□ 0.75
Sh3kbp1Q8R550 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Sh3kbp1Q8R550 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Sh3kbp1Q8R550 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Sh3kbp1Q8R550 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.73■□□□□ 0.75
Sh3kbp1Q8R550 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.73■□□□□ 0.75
Sh3kbp1Q8R550 Spcs1-207ENSMUST00000228767 1008 ntBASIC19.73■□□□□ 0.75
Sh3kbp1Q8R550 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sh3kbp1Q8R550 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sh3kbp1Q8R550 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Sh3kbp1Q8R550 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sh3kbp1Q8R550 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sh3kbp1Q8R550 AA386476-201ENSMUST00000098781 1665 ntBASIC19.72■□□□□ 0.75
Sh3kbp1Q8R550 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Sh3kbp1Q8R550 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sh3kbp1Q8R550 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sh3kbp1Q8R550 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sh3kbp1Q8R550 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Sh3kbp1Q8R550 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Sh3kbp1Q8R550 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sh3kbp1Q8R550 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sh3kbp1Q8R550 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Sh3kbp1Q8R550 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Sh3kbp1Q8R550 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Sh3kbp1Q8R550 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC19.71■□□□□ 0.75
Sh3kbp1Q8R550 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sh3kbp1Q8R550 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sh3kbp1Q8R550 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
Sh3kbp1Q8R550 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sh3kbp1Q8R550 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sh3kbp1Q8R550 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sh3kbp1Q8R550 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sh3kbp1Q8R550 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sh3kbp1Q8R550 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Sh3kbp1Q8R550 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sh3kbp1Q8R550 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sh3kbp1Q8R550 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Sh3kbp1Q8R550 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.7■□□□□ 0.74
Sh3kbp1Q8R550 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
Sh3kbp1Q8R550 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.7■□□□□ 0.74
Sh3kbp1Q8R550 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sh3kbp1Q8R550 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sh3kbp1Q8R550 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
Sh3kbp1Q8R550 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.7■□□□□ 0.74
Sh3kbp1Q8R550 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.7■□□□□ 0.74
Sh3kbp1Q8R550 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Sh3kbp1Q8R550 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sh3kbp1Q8R550 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Sh3kbp1Q8R550 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sh3kbp1Q8R550 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms