Protein–RNA interactions for Protein: Q8R3V6

Cuedc1, CUE domain-containing protein 1, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cuedc1Q8R3V6 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cuedc1Q8R3V6 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
Cuedc1Q8R3V6 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cuedc1Q8R3V6 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Cuedc1Q8R3V6 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Cuedc1Q8R3V6 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cuedc1Q8R3V6 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cuedc1Q8R3V6 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cuedc1Q8R3V6 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Cuedc1Q8R3V6 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cuedc1Q8R3V6 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cuedc1Q8R3V6 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cuedc1Q8R3V6 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cuedc1Q8R3V6 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cuedc1Q8R3V6 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.33■□□□□ 0.36
Cuedc1Q8R3V6 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cuedc1Q8R3V6 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cuedc1Q8R3V6 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cuedc1Q8R3V6 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cuedc1Q8R3V6 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cuedc1Q8R3V6 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cuedc1Q8R3V6 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cuedc1Q8R3V6 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cuedc1Q8R3V6 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.32■□□□□ 0.36
Cuedc1Q8R3V6 Mir5133-201ENSMUST00000174955 77 ntBASIC17.32■□□□□ 0.36
Cuedc1Q8R3V6 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.32■□□□□ 0.36
Cuedc1Q8R3V6 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.32■□□□□ 0.36
Cuedc1Q8R3V6 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cuedc1Q8R3V6 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cuedc1Q8R3V6 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC17.32■□□□□ 0.36
Cuedc1Q8R3V6 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cuedc1Q8R3V6 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cuedc1Q8R3V6 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cuedc1Q8R3V6 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cuedc1Q8R3V6 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Cuedc1Q8R3V6 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cuedc1Q8R3V6 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cuedc1Q8R3V6 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cuedc1Q8R3V6 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cuedc1Q8R3V6 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.31■□□□□ 0.36
Cuedc1Q8R3V6 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Cuedc1Q8R3V6 Gm7514-201ENSMUST00000209475 934 ntBASIC17.31■□□□□ 0.36
Cuedc1Q8R3V6 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cuedc1Q8R3V6 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cuedc1Q8R3V6 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.31■□□□□ 0.36
Cuedc1Q8R3V6 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.3■□□□□ 0.36
Cuedc1Q8R3V6 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cuedc1Q8R3V6 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cuedc1Q8R3V6 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.3■□□□□ 0.36
Cuedc1Q8R3V6 Gm10653-202ENSMUST00000139570 835 ntBASIC17.3■□□□□ 0.36
Cuedc1Q8R3V6 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cuedc1Q8R3V6 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cuedc1Q8R3V6 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.3■□□□□ 0.36
Cuedc1Q8R3V6 Gm22240-201ENSMUST00000175225 82 ntBASIC17.3■□□□□ 0.36
Cuedc1Q8R3V6 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cuedc1Q8R3V6 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cuedc1Q8R3V6 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cuedc1Q8R3V6 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.3■□□□□ 0.36
Cuedc1Q8R3V6 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cuedc1Q8R3V6 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cuedc1Q8R3V6 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC17.29■□□□□ 0.36
Cuedc1Q8R3V6 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cuedc1Q8R3V6 Gm27801-201ENSMUST00000184174 223 ntBASIC17.29■□□□□ 0.36
Cuedc1Q8R3V6 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cuedc1Q8R3V6 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC17.29■□□□□ 0.36
Cuedc1Q8R3V6 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cuedc1Q8R3V6 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cuedc1Q8R3V6 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Cuedc1Q8R3V6 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cuedc1Q8R3V6 Golph3-202ENSMUST00000226517 2359 ntBASIC17.29■□□□□ 0.36
Cuedc1Q8R3V6 Reep4-203ENSMUST00000226563 1444 ntBASIC17.29■□□□□ 0.36
Cuedc1Q8R3V6 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cuedc1Q8R3V6 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.28■□□□□ 0.36
Cuedc1Q8R3V6 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Cuedc1Q8R3V6 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cuedc1Q8R3V6 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cuedc1Q8R3V6 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Cuedc1Q8R3V6 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Cuedc1Q8R3V6 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Cuedc1Q8R3V6 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.28■□□□□ 0.36
Cuedc1Q8R3V6 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.28■□□□□ 0.36
Cuedc1Q8R3V6 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Cuedc1Q8R3V6 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cuedc1Q8R3V6 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
Cuedc1Q8R3V6 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cuedc1Q8R3V6 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Cuedc1Q8R3V6 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.28■□□□□ 0.36
Cuedc1Q8R3V6 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cuedc1Q8R3V6 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cuedc1Q8R3V6 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cuedc1Q8R3V6 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Cuedc1Q8R3V6 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Cuedc1Q8R3V6 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cuedc1Q8R3V6 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Cuedc1Q8R3V6 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cuedc1Q8R3V6 Gm8520-201ENSMUST00000186517 868 ntBASIC17.27■□□□□ 0.36
Cuedc1Q8R3V6 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.27■□□□□ 0.36
Cuedc1Q8R3V6 Gm4968-201ENSMUST00000071458 858 ntBASIC17.27■□□□□ 0.36
Cuedc1Q8R3V6 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cuedc1Q8R3V6 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms