Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Zcchc9Q8R1J3 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Zcchc9Q8R1J3 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Zcchc9Q8R1J3 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Zcchc9Q8R1J3 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Zcchc9Q8R1J3 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Zcchc9Q8R1J3 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Zcchc9Q8R1J3 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Zcchc9Q8R1J3 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Zcchc9Q8R1J3 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Zcchc9Q8R1J3 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Zcchc9Q8R1J3 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.11■□□□□ 0.65
Zcchc9Q8R1J3 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.11■□□□□ 0.65
Zcchc9Q8R1J3 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
Zcchc9Q8R1J3 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Zcchc9Q8R1J3 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Zcchc9Q8R1J3 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Zcchc9Q8R1J3 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Zcchc9Q8R1J3 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Zcchc9Q8R1J3 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Zcchc9Q8R1J3 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Zcchc9Q8R1J3 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Zcchc9Q8R1J3 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Zcchc9Q8R1J3 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Zcchc9Q8R1J3 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Zcchc9Q8R1J3 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.1■□□□□ 0.65
Zcchc9Q8R1J3 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.1■□□□□ 0.65
Zcchc9Q8R1J3 Mir5133-201ENSMUST00000174955 77 ntBASIC19.1■□□□□ 0.65
Zcchc9Q8R1J3 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Zcchc9Q8R1J3 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Zcchc9Q8R1J3 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Zcchc9Q8R1J3 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Zcchc9Q8R1J3 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Zcchc9Q8R1J3 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Zcchc9Q8R1J3 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Zcchc9Q8R1J3 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Zcchc9Q8R1J3 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.09■□□□□ 0.65
Zcchc9Q8R1J3 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Zcchc9Q8R1J3 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.09■□□□□ 0.65
Zcchc9Q8R1J3 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Zcchc9Q8R1J3 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Zcchc9Q8R1J3 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Zcchc9Q8R1J3 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.09■□□□□ 0.65
Zcchc9Q8R1J3 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Zcchc9Q8R1J3 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Zcchc9Q8R1J3 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Zcchc9Q8R1J3 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Zcchc9Q8R1J3 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Zcchc9Q8R1J3 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Zcchc9Q8R1J3 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Zcchc9Q8R1J3 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Zcchc9Q8R1J3 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.08■□□□□ 0.64
Zcchc9Q8R1J3 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.08■□□□□ 0.64
Zcchc9Q8R1J3 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Zcchc9Q8R1J3 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.08■□□□□ 0.64
Zcchc9Q8R1J3 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.08■□□□□ 0.64
Zcchc9Q8R1J3 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Zcchc9Q8R1J3 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Zcchc9Q8R1J3 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Zcchc9Q8R1J3 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Zcchc9Q8R1J3 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Zcchc9Q8R1J3 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Zcchc9Q8R1J3 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Zcchc9Q8R1J3 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Zcchc9Q8R1J3 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Zcchc9Q8R1J3 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Zcchc9Q8R1J3 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Zcchc9Q8R1J3 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Zcchc9Q8R1J3 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.07■□□□□ 0.64
Zcchc9Q8R1J3 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Zcchc9Q8R1J3 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Zcchc9Q8R1J3 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.06■□□□□ 0.64
Zcchc9Q8R1J3 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Zcchc9Q8R1J3 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Zcchc9Q8R1J3 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.06■□□□□ 0.64
Zcchc9Q8R1J3 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Zcchc9Q8R1J3 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Zcchc9Q8R1J3 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.06■□□□□ 0.64
Zcchc9Q8R1J3 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Zcchc9Q8R1J3 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Zcchc9Q8R1J3 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Zcchc9Q8R1J3 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Zcchc9Q8R1J3 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Zcchc9Q8R1J3 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.05■□□□□ 0.64
Zcchc9Q8R1J3 Gm12441-201ENSMUST00000121806 588 ntBASIC19.05■□□□□ 0.64
Zcchc9Q8R1J3 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Zcchc9Q8R1J3 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19.05■□□□□ 0.64
Zcchc9Q8R1J3 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Zcchc9Q8R1J3 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Zcchc9Q8R1J3 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Zcchc9Q8R1J3 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Zcchc9Q8R1J3 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Zcchc9Q8R1J3 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Zcchc9Q8R1J3 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Zcchc9Q8R1J3 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Zcchc9Q8R1J3 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.05■□□□□ 0.64
Zcchc9Q8R1J3 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
Zcchc9Q8R1J3 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Zcchc9Q8R1J3 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.04■□□□□ 0.64
Zcchc9Q8R1J3 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms