Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.9■□□□□ 0.62
Alms1Q8K4E0 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Alms1Q8K4E0 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.9■□□□□ 0.62
Alms1Q8K4E0 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Alms1Q8K4E0 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
Alms1Q8K4E0 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Alms1Q8K4E0 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
Alms1Q8K4E0 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Alms1Q8K4E0 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Alms1Q8K4E0 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Alms1Q8K4E0 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Alms1Q8K4E0 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Alms1Q8K4E0 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.89■□□□□ 0.61
Alms1Q8K4E0 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Alms1Q8K4E0 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Alms1Q8K4E0 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Alms1Q8K4E0 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Alms1Q8K4E0 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Alms1Q8K4E0 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Alms1Q8K4E0 Gm27275-201ENSMUST00000184318 272 ntBASIC18.88■□□□□ 0.61
Alms1Q8K4E0 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.88■□□□□ 0.61
Alms1Q8K4E0 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Alms1Q8K4E0 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Alms1Q8K4E0 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Alms1Q8K4E0 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Alms1Q8K4E0 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Alms1Q8K4E0 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
Alms1Q8K4E0 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.87■□□□□ 0.61
Alms1Q8K4E0 Trmt13-210ENSMUST00000198454 880 ntBASIC18.87■□□□□ 0.61
Alms1Q8K4E0 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Alms1Q8K4E0 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Alms1Q8K4E0 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Alms1Q8K4E0 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Alms1Q8K4E0 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Alms1Q8K4E0 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC18.87■□□□□ 0.61
Alms1Q8K4E0 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.87■□□□□ 0.61
Alms1Q8K4E0 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Alms1Q8K4E0 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Alms1Q8K4E0 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Alms1Q8K4E0 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Alms1Q8K4E0 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Alms1Q8K4E0 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Alms1Q8K4E0 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Alms1Q8K4E0 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Alms1Q8K4E0 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Alms1Q8K4E0 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Alms1Q8K4E0 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Alms1Q8K4E0 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.86■□□□□ 0.61
Alms1Q8K4E0 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Alms1Q8K4E0 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Alms1Q8K4E0 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Alms1Q8K4E0 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Alms1Q8K4E0 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Alms1Q8K4E0 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Alms1Q8K4E0 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Alms1Q8K4E0 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Alms1Q8K4E0 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Alms1Q8K4E0 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.85■□□□□ 0.61
Alms1Q8K4E0 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Alms1Q8K4E0 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Alms1Q8K4E0 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Alms1Q8K4E0 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
Alms1Q8K4E0 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Alms1Q8K4E0 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Alms1Q8K4E0 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Alms1Q8K4E0 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Alms1Q8K4E0 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Alms1Q8K4E0 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Alms1Q8K4E0 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Alms1Q8K4E0 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
Alms1Q8K4E0 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Alms1Q8K4E0 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Alms1Q8K4E0 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Alms1Q8K4E0 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Alms1Q8K4E0 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Alms1Q8K4E0 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Alms1Q8K4E0 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Alms1Q8K4E0 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Alms1Q8K4E0 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Alms1Q8K4E0 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Alms1Q8K4E0 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Alms1Q8K4E0 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Alms1Q8K4E0 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Alms1Q8K4E0 Gm13836-201ENSMUST00000121159 501 ntBASIC18.83■□□□□ 0.61
Alms1Q8K4E0 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Alms1Q8K4E0 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Alms1Q8K4E0 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Alms1Q8K4E0 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.83■□□□□ 0.6
Alms1Q8K4E0 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Alms1Q8K4E0 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Alms1Q8K4E0 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Alms1Q8K4E0 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Alms1Q8K4E0 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Alms1Q8K4E0 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Alms1Q8K4E0 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Alms1Q8K4E0 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Alms1Q8K4E0 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Alms1Q8K4E0 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Alms1Q8K4E0 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Alms1Q8K4E0 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms