Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Rtn1Q8K0T0 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rtn1Q8K0T0 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Rtn1Q8K0T0 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Rtn1Q8K0T0 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC22.18■■□□□ 1.14
Rtn1Q8K0T0 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Rtn1Q8K0T0 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC22.18■■□□□ 1.14
Rtn1Q8K0T0 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rtn1Q8K0T0 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC22.18■■□□□ 1.14
Rtn1Q8K0T0 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Rtn1Q8K0T0 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC22.18■■□□□ 1.14
Rtn1Q8K0T0 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC22.17■■□□□ 1.14
Rtn1Q8K0T0 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC22.17■■□□□ 1.14
Rtn1Q8K0T0 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC22.17■■□□□ 1.14
Rtn1Q8K0T0 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Rtn1Q8K0T0 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Rtn1Q8K0T0 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Rtn1Q8K0T0 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rtn1Q8K0T0 Gm14281-201ENSMUST00000121700 1294 ntBASIC22.17■■□□□ 1.14
Rtn1Q8K0T0 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rtn1Q8K0T0 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC22.17■■□□□ 1.14
Rtn1Q8K0T0 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
Rtn1Q8K0T0 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Rtn1Q8K0T0 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rtn1Q8K0T0 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rtn1Q8K0T0 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rtn1Q8K0T0 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
Rtn1Q8K0T0 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC22.17■■□□□ 1.14
Rtn1Q8K0T0 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rtn1Q8K0T0 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Rtn1Q8K0T0 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Rtn1Q8K0T0 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Rtn1Q8K0T0 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC22.16■■□□□ 1.14
Rtn1Q8K0T0 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Rtn1Q8K0T0 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Rtn1Q8K0T0 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Rtn1Q8K0T0 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Rtn1Q8K0T0 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Rtn1Q8K0T0 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Rtn1Q8K0T0 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Rtn1Q8K0T0 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Rtn1Q8K0T0 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Rtn1Q8K0T0 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rtn1Q8K0T0 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rtn1Q8K0T0 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Rtn1Q8K0T0 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rtn1Q8K0T0 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Rtn1Q8K0T0 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC22.15■■□□□ 1.14
Rtn1Q8K0T0 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Rtn1Q8K0T0 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Rtn1Q8K0T0 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
Rtn1Q8K0T0 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
Rtn1Q8K0T0 Gm37352-201ENSMUST00000193908 2181 ntBASIC22.14■■□□□ 1.13
Rtn1Q8K0T0 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Rtn1Q8K0T0 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Rtn1Q8K0T0 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC22.14■■□□□ 1.13
Rtn1Q8K0T0 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Rtn1Q8K0T0 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Rtn1Q8K0T0 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC22.14■■□□□ 1.13
Rtn1Q8K0T0 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Rtn1Q8K0T0 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Rtn1Q8K0T0 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rtn1Q8K0T0 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Rtn1Q8K0T0 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC22.13■■□□□ 1.13
Rtn1Q8K0T0 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
Rtn1Q8K0T0 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
Rtn1Q8K0T0 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
Rtn1Q8K0T0 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
Rtn1Q8K0T0 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC22.13■■□□□ 1.13
Rtn1Q8K0T0 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
Rtn1Q8K0T0 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Rtn1Q8K0T0 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC22.12■■□□□ 1.13
Rtn1Q8K0T0 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
Rtn1Q8K0T0 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
Rtn1Q8K0T0 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rtn1Q8K0T0 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rtn1Q8K0T0 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rtn1Q8K0T0 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rtn1Q8K0T0 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rtn1Q8K0T0 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rtn1Q8K0T0 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rtn1Q8K0T0 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Rtn1Q8K0T0 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Rtn1Q8K0T0 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Rtn1Q8K0T0 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
Rtn1Q8K0T0 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
Rtn1Q8K0T0 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC22.11■■□□□ 1.13
Rtn1Q8K0T0 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
Rtn1Q8K0T0 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Rtn1Q8K0T0 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Rtn1Q8K0T0 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Rtn1Q8K0T0 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC22.11■■□□□ 1.13
Rtn1Q8K0T0 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC22.11■■□□□ 1.13
Rtn1Q8K0T0 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rtn1Q8K0T0 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rtn1Q8K0T0 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Rtn1Q8K0T0 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Rtn1Q8K0T0 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Rtn1Q8K0T0 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Rtn1Q8K0T0 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms