Protein–RNA interactions for Protein: Q8JZS7

Hmgcll1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcll1Q8JZS7 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Hmgcll1Q8JZS7 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hmgcll1Q8JZS7 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hmgcll1Q8JZS7 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.86■□□□□ 0.77
Hmgcll1Q8JZS7 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Hmgcll1Q8JZS7 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.86■□□□□ 0.77
Hmgcll1Q8JZS7 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hmgcll1Q8JZS7 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hmgcll1Q8JZS7 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hmgcll1Q8JZS7 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Hmgcll1Q8JZS7 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.86■□□□□ 0.77
Hmgcll1Q8JZS7 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Hmgcll1Q8JZS7 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hmgcll1Q8JZS7 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Hmgcll1Q8JZS7 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hmgcll1Q8JZS7 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hmgcll1Q8JZS7 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hmgcll1Q8JZS7 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Hmgcll1Q8JZS7 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Hmgcll1Q8JZS7 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Hmgcll1Q8JZS7 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Hmgcll1Q8JZS7 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hmgcll1Q8JZS7 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hmgcll1Q8JZS7 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.84■□□□□ 0.77
Hmgcll1Q8JZS7 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hmgcll1Q8JZS7 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hmgcll1Q8JZS7 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hmgcll1Q8JZS7 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Hmgcll1Q8JZS7 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.84■□□□□ 0.77
Hmgcll1Q8JZS7 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Hmgcll1Q8JZS7 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Hmgcll1Q8JZS7 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Hmgcll1Q8JZS7 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Hmgcll1Q8JZS7 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.83■□□□□ 0.77
Hmgcll1Q8JZS7 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.83■□□□□ 0.77
Hmgcll1Q8JZS7 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.83■□□□□ 0.77
Hmgcll1Q8JZS7 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
Hmgcll1Q8JZS7 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.83■□□□□ 0.77
Hmgcll1Q8JZS7 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.76
Hmgcll1Q8JZS7 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Hmgcll1Q8JZS7 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Hmgcll1Q8JZS7 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Hmgcll1Q8JZS7 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Hmgcll1Q8JZS7 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Hmgcll1Q8JZS7 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Hmgcll1Q8JZS7 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hmgcll1Q8JZS7 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hmgcll1Q8JZS7 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Hmgcll1Q8JZS7 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hmgcll1Q8JZS7 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hmgcll1Q8JZS7 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Hmgcll1Q8JZS7 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Hmgcll1Q8JZS7 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
Hmgcll1Q8JZS7 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hmgcll1Q8JZS7 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hmgcll1Q8JZS7 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.82■□□□□ 0.76
Hmgcll1Q8JZS7 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Hmgcll1Q8JZS7 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Hmgcll1Q8JZS7 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hmgcll1Q8JZS7 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Hmgcll1Q8JZS7 Gm12933-201ENSMUST00000120203 872 ntBASIC19.81■□□□□ 0.76
Hmgcll1Q8JZS7 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Hmgcll1Q8JZS7 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.81■□□□□ 0.76
Hmgcll1Q8JZS7 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.81■□□□□ 0.76
Hmgcll1Q8JZS7 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Hmgcll1Q8JZS7 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.81■□□□□ 0.76
Hmgcll1Q8JZS7 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.81■□□□□ 0.76
Hmgcll1Q8JZS7 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
Hmgcll1Q8JZS7 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hmgcll1Q8JZS7 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hmgcll1Q8JZS7 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Hmgcll1Q8JZS7 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Hmgcll1Q8JZS7 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.81■□□□□ 0.76
Hmgcll1Q8JZS7 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hmgcll1Q8JZS7 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hmgcll1Q8JZS7 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hmgcll1Q8JZS7 Gm6420-201ENSMUST00000193885 723 ntBASIC19.8■□□□□ 0.76
Hmgcll1Q8JZS7 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Hmgcll1Q8JZS7 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.8■□□□□ 0.76
Hmgcll1Q8JZS7 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hmgcll1Q8JZS7 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Hmgcll1Q8JZS7 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hmgcll1Q8JZS7 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hmgcll1Q8JZS7 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.79■□□□□ 0.76
Hmgcll1Q8JZS7 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.79■□□□□ 0.76
Hmgcll1Q8JZS7 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Hmgcll1Q8JZS7 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hmgcll1Q8JZS7 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Hmgcll1Q8JZS7 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Hmgcll1Q8JZS7 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Hmgcll1Q8JZS7 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hmgcll1Q8JZS7 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hmgcll1Q8JZS7 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hmgcll1Q8JZS7 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hmgcll1Q8JZS7 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hmgcll1Q8JZS7 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Hmgcll1Q8JZS7 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hmgcll1Q8JZS7 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Hmgcll1Q8JZS7 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Hmgcll1Q8JZS7 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms