Protein–RNA interactions for Protein: Q8JZK6

Trim61, MCG22896, isoform CRA_b, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim61Q8JZK6 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.2■□□□□ 0.82
Trim61Q8JZK6 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trim61Q8JZK6 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.2■□□□□ 0.82
Trim61Q8JZK6 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim61Q8JZK6 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Trim61Q8JZK6 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trim61Q8JZK6 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim61Q8JZK6 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Trim61Q8JZK6 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.19■□□□□ 0.82
Trim61Q8JZK6 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim61Q8JZK6 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim61Q8JZK6 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim61Q8JZK6 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC20.19■□□□□ 0.82
Trim61Q8JZK6 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
Trim61Q8JZK6 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim61Q8JZK6 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim61Q8JZK6 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim61Q8JZK6 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Trim61Q8JZK6 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim61Q8JZK6 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim61Q8JZK6 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim61Q8JZK6 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim61Q8JZK6 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim61Q8JZK6 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trim61Q8JZK6 Gm4968-201ENSMUST00000071458 858 ntBASIC20.18■□□□□ 0.82
Trim61Q8JZK6 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim61Q8JZK6 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim61Q8JZK6 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Trim61Q8JZK6 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Trim61Q8JZK6 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim61Q8JZK6 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim61Q8JZK6 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim61Q8JZK6 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim61Q8JZK6 Gm7290-201ENSMUST00000104990 617 ntBASIC20.17■□□□□ 0.82
Trim61Q8JZK6 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.17■□□□□ 0.82
Trim61Q8JZK6 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trim61Q8JZK6 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim61Q8JZK6 Gm12918-201ENSMUST00000120234 636 ntBASIC20.17■□□□□ 0.82
Trim61Q8JZK6 Gm15710-201ENSMUST00000121821 636 ntBASIC20.17■□□□□ 0.82
Trim61Q8JZK6 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.17■□□□□ 0.82
Trim61Q8JZK6 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.17■□□□□ 0.82
Trim61Q8JZK6 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.17■□□□□ 0.82
Trim61Q8JZK6 Gm5075-201ENSMUST00000196916 622 ntBASIC20.17■□□□□ 0.82
Trim61Q8JZK6 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.17■□□□□ 0.82
Trim61Q8JZK6 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.17■□□□□ 0.82
Trim61Q8JZK6 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.17■□□□□ 0.82
Trim61Q8JZK6 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim61Q8JZK6 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trim61Q8JZK6 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Trim61Q8JZK6 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim61Q8JZK6 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim61Q8JZK6 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.17■□□□□ 0.82
Trim61Q8JZK6 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trim61Q8JZK6 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim61Q8JZK6 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.16■□□□□ 0.82
Trim61Q8JZK6 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trim61Q8JZK6 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim61Q8JZK6 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trim61Q8JZK6 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.16■□□□□ 0.82
Trim61Q8JZK6 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
Trim61Q8JZK6 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trim61Q8JZK6 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Trim61Q8JZK6 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim61Q8JZK6 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim61Q8JZK6 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim61Q8JZK6 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.16■□□□□ 0.82
Trim61Q8JZK6 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Trim61Q8JZK6 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim61Q8JZK6 Gm13534-201ENSMUST00000121169 513 ntBASIC20.15■□□□□ 0.82
Trim61Q8JZK6 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
Trim61Q8JZK6 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.15■□□□□ 0.82
Trim61Q8JZK6 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim61Q8JZK6 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim61Q8JZK6 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.15■□□□□ 0.82
Trim61Q8JZK6 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim61Q8JZK6 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim61Q8JZK6 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Trim61Q8JZK6 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.15■□□□□ 0.82
Trim61Q8JZK6 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Trim61Q8JZK6 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Trim61Q8JZK6 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Trim61Q8JZK6 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim61Q8JZK6 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.14■□□□□ 0.81
Trim61Q8JZK6 Gm6420-201ENSMUST00000193885 723 ntBASIC20.14■□□□□ 0.81
Trim61Q8JZK6 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Trim61Q8JZK6 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.14■□□□□ 0.81
Trim61Q8JZK6 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim61Q8JZK6 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim61Q8JZK6 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim61Q8JZK6 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Trim61Q8JZK6 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Trim61Q8JZK6 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
Trim61Q8JZK6 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim61Q8JZK6 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.13■□□□□ 0.81
Trim61Q8JZK6 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim61Q8JZK6 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim61Q8JZK6 Gm13148-201ENSMUST00000118892 745 ntBASIC20.13■□□□□ 0.81
Trim61Q8JZK6 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Trim61Q8JZK6 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Trim61Q8JZK6 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms