Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Clip4Q8CI96 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.27■□□□□ 0.68
Clip4Q8CI96 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.27■□□□□ 0.68
Clip4Q8CI96 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Clip4Q8CI96 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Clip4Q8CI96 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Clip4Q8CI96 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Clip4Q8CI96 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Clip4Q8CI96 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Clip4Q8CI96 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Clip4Q8CI96 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Clip4Q8CI96 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Clip4Q8CI96 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Clip4Q8CI96 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.26■□□□□ 0.67
Clip4Q8CI96 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.26■□□□□ 0.67
Clip4Q8CI96 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
Clip4Q8CI96 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.26■□□□□ 0.67
Clip4Q8CI96 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Clip4Q8CI96 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Clip4Q8CI96 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Clip4Q8CI96 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clip4Q8CI96 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clip4Q8CI96 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Clip4Q8CI96 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Clip4Q8CI96 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clip4Q8CI96 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Clip4Q8CI96 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Clip4Q8CI96 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clip4Q8CI96 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.24■□□□□ 0.67
Clip4Q8CI96 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clip4Q8CI96 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Clip4Q8CI96 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clip4Q8CI96 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clip4Q8CI96 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.24■□□□□ 0.67
Clip4Q8CI96 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Clip4Q8CI96 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Clip4Q8CI96 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Clip4Q8CI96 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Clip4Q8CI96 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Clip4Q8CI96 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.23■□□□□ 0.67
Clip4Q8CI96 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clip4Q8CI96 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
Clip4Q8CI96 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.23■□□□□ 0.67
Clip4Q8CI96 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Clip4Q8CI96 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clip4Q8CI96 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Clip4Q8CI96 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clip4Q8CI96 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clip4Q8CI96 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Clip4Q8CI96 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clip4Q8CI96 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clip4Q8CI96 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clip4Q8CI96 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clip4Q8CI96 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clip4Q8CI96 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.22■□□□□ 0.67
Clip4Q8CI96 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clip4Q8CI96 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
Clip4Q8CI96 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Clip4Q8CI96 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clip4Q8CI96 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Clip4Q8CI96 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clip4Q8CI96 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clip4Q8CI96 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clip4Q8CI96 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.22■□□□□ 0.67
Clip4Q8CI96 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clip4Q8CI96 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.22■□□□□ 0.67
Clip4Q8CI96 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clip4Q8CI96 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clip4Q8CI96 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Clip4Q8CI96 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clip4Q8CI96 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Clip4Q8CI96 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Clip4Q8CI96 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clip4Q8CI96 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clip4Q8CI96 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clip4Q8CI96 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clip4Q8CI96 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clip4Q8CI96 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Clip4Q8CI96 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
Clip4Q8CI96 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.2■□□□□ 0.66
Clip4Q8CI96 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clip4Q8CI96 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Clip4Q8CI96 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Clip4Q8CI96 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Clip4Q8CI96 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clip4Q8CI96 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clip4Q8CI96 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clip4Q8CI96 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
Clip4Q8CI96 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Clip4Q8CI96 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clip4Q8CI96 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Clip4Q8CI96 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.2■□□□□ 0.66
Clip4Q8CI96 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clip4Q8CI96 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clip4Q8CI96 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Clip4Q8CI96 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clip4Q8CI96 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clip4Q8CI96 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clip4Q8CI96 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clip4Q8CI96 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms