Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ShfQ8CG80 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
ShfQ8CG80 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
ShfQ8CG80 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ShfQ8CG80 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
ShfQ8CG80 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
ShfQ8CG80 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ShfQ8CG80 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ShfQ8CG80 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ShfQ8CG80 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ShfQ8CG80 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
ShfQ8CG80 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
ShfQ8CG80 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ShfQ8CG80 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ShfQ8CG80 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ShfQ8CG80 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ShfQ8CG80 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
ShfQ8CG80 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.11■□□□□ 0.33
ShfQ8CG80 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ShfQ8CG80 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ShfQ8CG80 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ShfQ8CG80 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ShfQ8CG80 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ShfQ8CG80 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC17.11■□□□□ 0.33
ShfQ8CG80 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC17.11■□□□□ 0.33
ShfQ8CG80 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ShfQ8CG80 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
ShfQ8CG80 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ShfQ8CG80 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
ShfQ8CG80 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
ShfQ8CG80 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ShfQ8CG80 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ShfQ8CG80 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ShfQ8CG80 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.11■□□□□ 0.33
ShfQ8CG80 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
ShfQ8CG80 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.1■□□□□ 0.33
ShfQ8CG80 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ShfQ8CG80 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
ShfQ8CG80 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.1■□□□□ 0.33
ShfQ8CG80 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ShfQ8CG80 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.1■□□□□ 0.33
ShfQ8CG80 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ShfQ8CG80 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ShfQ8CG80 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
ShfQ8CG80 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ShfQ8CG80 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ShfQ8CG80 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.09■□□□□ 0.33
ShfQ8CG80 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
ShfQ8CG80 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.09■□□□□ 0.33
ShfQ8CG80 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ShfQ8CG80 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
ShfQ8CG80 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.09■□□□□ 0.33
ShfQ8CG80 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.09■□□□□ 0.33
ShfQ8CG80 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ShfQ8CG80 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
ShfQ8CG80 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
ShfQ8CG80 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
ShfQ8CG80 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
ShfQ8CG80 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17.08■□□□□ 0.32
ShfQ8CG80 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.08■□□□□ 0.32
ShfQ8CG80 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
ShfQ8CG80 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
ShfQ8CG80 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
ShfQ8CG80 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
ShfQ8CG80 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.08■□□□□ 0.32
ShfQ8CG80 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ShfQ8CG80 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ShfQ8CG80 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ShfQ8CG80 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ShfQ8CG80 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ShfQ8CG80 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ShfQ8CG80 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ShfQ8CG80 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ShfQ8CG80 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ShfQ8CG80 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ShfQ8CG80 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
ShfQ8CG80 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ShfQ8CG80 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ShfQ8CG80 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
ShfQ8CG80 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
ShfQ8CG80 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ShfQ8CG80 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ShfQ8CG80 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.06■□□□□ 0.32
ShfQ8CG80 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC17.06■□□□□ 0.32
ShfQ8CG80 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ShfQ8CG80 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.06■□□□□ 0.32
ShfQ8CG80 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ShfQ8CG80 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
ShfQ8CG80 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ShfQ8CG80 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
ShfQ8CG80 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ShfQ8CG80 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ShfQ8CG80 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ShfQ8CG80 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ShfQ8CG80 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
ShfQ8CG80 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ShfQ8CG80 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ShfQ8CG80 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.05■□□□□ 0.32
ShfQ8CG80 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ShfQ8CG80 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms