Protein–RNA interactions for Protein: Q8C7D3

Pabpc5, Poly A binding protein, cytoplasmic 5, mousemouse

Known RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpc5Q8C7D3 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pabpc5Q8C7D3 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pabpc5Q8C7D3 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Pabpc5Q8C7D3 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pabpc5Q8C7D3 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.22■□□□□ 0.67
Pabpc5Q8C7D3 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Pabpc5Q8C7D3 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC19.22■□□□□ 0.67
Pabpc5Q8C7D3 Gm18671-201ENSMUST00000214826 683 ntBASIC19.22■□□□□ 0.67
Pabpc5Q8C7D3 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pabpc5Q8C7D3 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Pabpc5Q8C7D3 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pabpc5Q8C7D3 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pabpc5Q8C7D3 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pabpc5Q8C7D3 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pabpc5Q8C7D3 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pabpc5Q8C7D3 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Pabpc5Q8C7D3 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.21■□□□□ 0.67
Pabpc5Q8C7D3 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.21■□□□□ 0.67
Pabpc5Q8C7D3 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pabpc5Q8C7D3 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pabpc5Q8C7D3 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Pabpc5Q8C7D3 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pabpc5Q8C7D3 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pabpc5Q8C7D3 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pabpc5Q8C7D3 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pabpc5Q8C7D3 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Pabpc5Q8C7D3 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pabpc5Q8C7D3 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pabpc5Q8C7D3 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Pabpc5Q8C7D3 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pabpc5Q8C7D3 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pabpc5Q8C7D3 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pabpc5Q8C7D3 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pabpc5Q8C7D3 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pabpc5Q8C7D3 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Pabpc5Q8C7D3 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pabpc5Q8C7D3 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Pabpc5Q8C7D3 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pabpc5Q8C7D3 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.19■□□□□ 0.66
Pabpc5Q8C7D3 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pabpc5Q8C7D3 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pabpc5Q8C7D3 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pabpc5Q8C7D3 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pabpc5Q8C7D3 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pabpc5Q8C7D3 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
Pabpc5Q8C7D3 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.18■□□□□ 0.66
Pabpc5Q8C7D3 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC19.18■□□□□ 0.66
Pabpc5Q8C7D3 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pabpc5Q8C7D3 Gm27801-201ENSMUST00000184174 223 ntBASIC19.18■□□□□ 0.66
Pabpc5Q8C7D3 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pabpc5Q8C7D3 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.18■□□□□ 0.66
Pabpc5Q8C7D3 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pabpc5Q8C7D3 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pabpc5Q8C7D3 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pabpc5Q8C7D3 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.17■□□□□ 0.66
Pabpc5Q8C7D3 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.17■□□□□ 0.66
Pabpc5Q8C7D3 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pabpc5Q8C7D3 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pabpc5Q8C7D3 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pabpc5Q8C7D3 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.17■□□□□ 0.66
Pabpc5Q8C7D3 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.17■□□□□ 0.66
Pabpc5Q8C7D3 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pabpc5Q8C7D3 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pabpc5Q8C7D3 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pabpc5Q8C7D3 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pabpc5Q8C7D3 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pabpc5Q8C7D3 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pabpc5Q8C7D3 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pabpc5Q8C7D3 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Pabpc5Q8C7D3 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.16■□□□□ 0.66
Pabpc5Q8C7D3 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pabpc5Q8C7D3 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pabpc5Q8C7D3 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pabpc5Q8C7D3 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pabpc5Q8C7D3 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pabpc5Q8C7D3 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pabpc5Q8C7D3 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pabpc5Q8C7D3 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pabpc5Q8C7D3 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pabpc5Q8C7D3 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.15■□□□□ 0.66
Pabpc5Q8C7D3 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pabpc5Q8C7D3 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Pabpc5Q8C7D3 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pabpc5Q8C7D3 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Pabpc5Q8C7D3 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.14■□□□□ 0.66
Pabpc5Q8C7D3 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
Pabpc5Q8C7D3 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Pabpc5Q8C7D3 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pabpc5Q8C7D3 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Pabpc5Q8C7D3 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pabpc5Q8C7D3 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pabpc5Q8C7D3 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pabpc5Q8C7D3 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pabpc5Q8C7D3 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pabpc5Q8C7D3 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Pabpc5Q8C7D3 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Pabpc5Q8C7D3 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Pabpc5Q8C7D3 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pabpc5Q8C7D3 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Pabpc5Q8C7D3 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 466.4 ms