Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ptcd1Q8C2E4 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ptcd1Q8C2E4 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC23.73■■□□□ 1.39
Ptcd1Q8C2E4 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
Ptcd1Q8C2E4 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ptcd1Q8C2E4 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ptcd1Q8C2E4 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ptcd1Q8C2E4 CT030146.1-201ENSMUST00000220919 217 ntBASIC23.73■■□□□ 1.39
Ptcd1Q8C2E4 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ptcd1Q8C2E4 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC23.72■■□□□ 1.39
Ptcd1Q8C2E4 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ptcd1Q8C2E4 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ptcd1Q8C2E4 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ptcd1Q8C2E4 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ptcd1Q8C2E4 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC23.72■■□□□ 1.39
Ptcd1Q8C2E4 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC23.72■■□□□ 1.39
Ptcd1Q8C2E4 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
Ptcd1Q8C2E4 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Ptcd1Q8C2E4 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Ptcd1Q8C2E4 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ptcd1Q8C2E4 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Ptcd1Q8C2E4 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Ptcd1Q8C2E4 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ptcd1Q8C2E4 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Ptcd1Q8C2E4 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.39
Ptcd1Q8C2E4 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC23.7■■□□□ 1.38
Ptcd1Q8C2E4 Gm10655-201ENSMUST00000098658 1397 ntBASIC23.7■■□□□ 1.38
Ptcd1Q8C2E4 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ptcd1Q8C2E4 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC23.7■■□□□ 1.38
Ptcd1Q8C2E4 AC122769.4-201ENSMUST00000228166 901 ntBASIC23.7■■□□□ 1.38
Ptcd1Q8C2E4 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ptcd1Q8C2E4 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ptcd1Q8C2E4 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ptcd1Q8C2E4 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Ptcd1Q8C2E4 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ptcd1Q8C2E4 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Ptcd1Q8C2E4 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ptcd1Q8C2E4 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ptcd1Q8C2E4 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ptcd1Q8C2E4 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
Ptcd1Q8C2E4 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC23.68■■□□□ 1.38
Ptcd1Q8C2E4 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC23.68■■□□□ 1.38
Ptcd1Q8C2E4 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Ptcd1Q8C2E4 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ptcd1Q8C2E4 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ptcd1Q8C2E4 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Ptcd1Q8C2E4 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ptcd1Q8C2E4 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Ptcd1Q8C2E4 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
Ptcd1Q8C2E4 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ptcd1Q8C2E4 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
Ptcd1Q8C2E4 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ptcd1Q8C2E4 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ptcd1Q8C2E4 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
Ptcd1Q8C2E4 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC23.67■■□□□ 1.38
Ptcd1Q8C2E4 Gm29241-201ENSMUST00000189260 1096 ntBASIC23.67■■□□□ 1.38
Ptcd1Q8C2E4 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
Ptcd1Q8C2E4 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ptcd1Q8C2E4 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
Ptcd1Q8C2E4 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ptcd1Q8C2E4 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Ptcd1Q8C2E4 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Ptcd1Q8C2E4 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ptcd1Q8C2E4 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
Ptcd1Q8C2E4 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC23.66■■□□□ 1.38
Ptcd1Q8C2E4 Gm44672-201ENSMUST00000206944 1098 ntBASIC23.66■■□□□ 1.38
Ptcd1Q8C2E4 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC23.66■■□□□ 1.38
Ptcd1Q8C2E4 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
Ptcd1Q8C2E4 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Ptcd1Q8C2E4 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ptcd1Q8C2E4 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Ptcd1Q8C2E4 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Ptcd1Q8C2E4 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ptcd1Q8C2E4 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ptcd1Q8C2E4 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC23.65■■□□□ 1.38
Ptcd1Q8C2E4 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Ptcd1Q8C2E4 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC23.65■■□□□ 1.38
Ptcd1Q8C2E4 Gm13534-201ENSMUST00000121169 513 ntBASIC23.65■■□□□ 1.38
Ptcd1Q8C2E4 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Ptcd1Q8C2E4 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC23.64■■□□□ 1.38
Ptcd1Q8C2E4 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC23.64■■□□□ 1.38
Ptcd1Q8C2E4 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
Ptcd1Q8C2E4 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Ptcd1Q8C2E4 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
Ptcd1Q8C2E4 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
Ptcd1Q8C2E4 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Ptcd1Q8C2E4 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC23.64■■□□□ 1.37
Ptcd1Q8C2E4 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Ptcd1Q8C2E4 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC23.64■■□□□ 1.37
Ptcd1Q8C2E4 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ptcd1Q8C2E4 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC23.63■■□□□ 1.37
Ptcd1Q8C2E4 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC23.63■■□□□ 1.37
Ptcd1Q8C2E4 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
Ptcd1Q8C2E4 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ptcd1Q8C2E4 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ptcd1Q8C2E4 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ptcd1Q8C2E4 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Ptcd1Q8C2E4 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC23.63■■□□□ 1.37
Ptcd1Q8C2E4 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Ptcd1Q8C2E4 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms