Protein–RNA interactions for Protein: Q8C0Q4

Nek11, Serine/threonine-protein kinase Nek11, mousemouse

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek11Q8C0Q4 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
Nek11Q8C0Q4 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
Nek11Q8C0Q4 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC22.85■■□□□ 1.25
Nek11Q8C0Q4 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Nek11Q8C0Q4 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Nek11Q8C0Q4 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC22.85■■□□□ 1.25
Nek11Q8C0Q4 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Nek11Q8C0Q4 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Nek11Q8C0Q4 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
Nek11Q8C0Q4 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Nek11Q8C0Q4 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Nek11Q8C0Q4 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
Nek11Q8C0Q4 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC22.84■■□□□ 1.25
Nek11Q8C0Q4 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Nek11Q8C0Q4 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Nek11Q8C0Q4 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.25
Nek11Q8C0Q4 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC22.83■■□□□ 1.25
Nek11Q8C0Q4 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC22.83■■□□□ 1.25
Nek11Q8C0Q4 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Nek11Q8C0Q4 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.25
Nek11Q8C0Q4 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Nek11Q8C0Q4 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
Nek11Q8C0Q4 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Nek11Q8C0Q4 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC22.83■■□□□ 1.25
Nek11Q8C0Q4 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Nek11Q8C0Q4 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Nek11Q8C0Q4 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Nek11Q8C0Q4 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Nek11Q8C0Q4 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC22.82■■□□□ 1.24
Nek11Q8C0Q4 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Nek11Q8C0Q4 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
Nek11Q8C0Q4 Gm7860-201ENSMUST00000121190 879 ntBASIC22.82■■□□□ 1.24
Nek11Q8C0Q4 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC22.82■■□□□ 1.24
Nek11Q8C0Q4 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Nek11Q8C0Q4 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC22.82■■□□□ 1.24
Nek11Q8C0Q4 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Nek11Q8C0Q4 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Nek11Q8C0Q4 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Nek11Q8C0Q4 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
Nek11Q8C0Q4 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Nek11Q8C0Q4 AC124603.1-201ENSMUST00000223843 308 ntBASIC22.81■■□□□ 1.24
Nek11Q8C0Q4 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
Nek11Q8C0Q4 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
Nek11Q8C0Q4 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
Nek11Q8C0Q4 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC22.81■■□□□ 1.24
Nek11Q8C0Q4 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Nek11Q8C0Q4 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Nek11Q8C0Q4 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Nek11Q8C0Q4 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC22.8■■□□□ 1.24
Nek11Q8C0Q4 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC22.8■■□□□ 1.24
Nek11Q8C0Q4 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC22.8■■□□□ 1.24
Nek11Q8C0Q4 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Nek11Q8C0Q4 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Nek11Q8C0Q4 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Nek11Q8C0Q4 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Nek11Q8C0Q4 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Nek11Q8C0Q4 Gm10129-202ENSMUST00000193100 1316 ntBASIC22.8■■□□□ 1.24
Nek11Q8C0Q4 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Nek11Q8C0Q4 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
Nek11Q8C0Q4 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
Nek11Q8C0Q4 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Nek11Q8C0Q4 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Nek11Q8C0Q4 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC22.79■■□□□ 1.24
Nek11Q8C0Q4 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC22.79■■□□□ 1.24
Nek11Q8C0Q4 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC22.79■■□□□ 1.24
Nek11Q8C0Q4 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Nek11Q8C0Q4 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Nek11Q8C0Q4 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Nek11Q8C0Q4 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Nek11Q8C0Q4 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC22.78■■□□□ 1.24
Nek11Q8C0Q4 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC22.77■■□□□ 1.24
Nek11Q8C0Q4 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Nek11Q8C0Q4 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Nek11Q8C0Q4 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC22.77■■□□□ 1.24
Nek11Q8C0Q4 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC22.77■■□□□ 1.24
Nek11Q8C0Q4 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Nek11Q8C0Q4 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.23
Nek11Q8C0Q4 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Nek11Q8C0Q4 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC22.76■■□□□ 1.23
Nek11Q8C0Q4 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Nek11Q8C0Q4 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Nek11Q8C0Q4 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC22.76■■□□□ 1.23
Nek11Q8C0Q4 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Nek11Q8C0Q4 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC22.76■■□□□ 1.23
Nek11Q8C0Q4 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Nek11Q8C0Q4 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Nek11Q8C0Q4 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Nek11Q8C0Q4 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Nek11Q8C0Q4 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Nek11Q8C0Q4 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Nek11Q8C0Q4 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
Nek11Q8C0Q4 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC22.76■■□□□ 1.23
Nek11Q8C0Q4 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Nek11Q8C0Q4 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Nek11Q8C0Q4 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Nek11Q8C0Q4 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC22.75■■□□□ 1.23
Nek11Q8C0Q4 Gm38205-201ENSMUST00000192243 258 ntBASIC22.75■■□□□ 1.23
Nek11Q8C0Q4 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Nek11Q8C0Q4 Gm10493-201ENSMUST00000097270 612 ntBASIC22.75■■□□□ 1.23
Nek11Q8C0Q4 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms