Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sh3rf2Q8BZT2 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.52■□□□□ 0.72
Sh3rf2Q8BZT2 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.52■□□□□ 0.72
Sh3rf2Q8BZT2 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.52■□□□□ 0.72
Sh3rf2Q8BZT2 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sh3rf2Q8BZT2 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sh3rf2Q8BZT2 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Sh3rf2Q8BZT2 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Sh3rf2Q8BZT2 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sh3rf2Q8BZT2 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.51■□□□□ 0.71
Sh3rf2Q8BZT2 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Sh3rf2Q8BZT2 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Sh3rf2Q8BZT2 Nespas-201ENSMUST00000143738 1083 ntBASIC19.51■□□□□ 0.71
Sh3rf2Q8BZT2 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Sh3rf2Q8BZT2 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.51■□□□□ 0.71
Sh3rf2Q8BZT2 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.51■□□□□ 0.71
Sh3rf2Q8BZT2 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sh3rf2Q8BZT2 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sh3rf2Q8BZT2 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.51■□□□□ 0.71
Sh3rf2Q8BZT2 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sh3rf2Q8BZT2 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sh3rf2Q8BZT2 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.5■□□□□ 0.71
Sh3rf2Q8BZT2 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sh3rf2Q8BZT2 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.5■□□□□ 0.71
Sh3rf2Q8BZT2 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Sh3rf2Q8BZT2 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
Sh3rf2Q8BZT2 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sh3rf2Q8BZT2 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Sh3rf2Q8BZT2 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sh3rf2Q8BZT2 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Sh3rf2Q8BZT2 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sh3rf2Q8BZT2 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sh3rf2Q8BZT2 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.49■□□□□ 0.71
Sh3rf2Q8BZT2 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.49■□□□□ 0.71
Sh3rf2Q8BZT2 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sh3rf2Q8BZT2 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sh3rf2Q8BZT2 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sh3rf2Q8BZT2 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sh3rf2Q8BZT2 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sh3rf2Q8BZT2 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sh3rf2Q8BZT2 Gm6365-201ENSMUST00000054711 744 ntBASIC19.48■□□□□ 0.71
Sh3rf2Q8BZT2 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Sh3rf2Q8BZT2 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Sh3rf2Q8BZT2 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
Sh3rf2Q8BZT2 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
Sh3rf2Q8BZT2 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sh3rf2Q8BZT2 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sh3rf2Q8BZT2 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sh3rf2Q8BZT2 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Sh3rf2Q8BZT2 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sh3rf2Q8BZT2 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.47■□□□□ 0.71
Sh3rf2Q8BZT2 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Sh3rf2Q8BZT2 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.47■□□□□ 0.71
Sh3rf2Q8BZT2 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sh3rf2Q8BZT2 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sh3rf2Q8BZT2 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sh3rf2Q8BZT2 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Sh3rf2Q8BZT2 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Sh3rf2Q8BZT2 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Sh3rf2Q8BZT2 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sh3rf2Q8BZT2 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.46■□□□□ 0.71
Sh3rf2Q8BZT2 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sh3rf2Q8BZT2 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sh3rf2Q8BZT2 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sh3rf2Q8BZT2 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sh3rf2Q8BZT2 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.46■□□□□ 0.71
Sh3rf2Q8BZT2 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Sh3rf2Q8BZT2 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sh3rf2Q8BZT2 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Sh3rf2Q8BZT2 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sh3rf2Q8BZT2 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sh3rf2Q8BZT2 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sh3rf2Q8BZT2 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sh3rf2Q8BZT2 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sh3rf2Q8BZT2 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sh3rf2Q8BZT2 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Sh3rf2Q8BZT2 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.45■□□□□ 0.7
Sh3rf2Q8BZT2 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Sh3rf2Q8BZT2 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Sh3rf2Q8BZT2 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sh3rf2Q8BZT2 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sh3rf2Q8BZT2 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Sh3rf2Q8BZT2 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sh3rf2Q8BZT2 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sh3rf2Q8BZT2 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sh3rf2Q8BZT2 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sh3rf2Q8BZT2 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
Sh3rf2Q8BZT2 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sh3rf2Q8BZT2 Gm7290-201ENSMUST00000104990 617 ntBASIC19.44■□□□□ 0.7
Sh3rf2Q8BZT2 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
Sh3rf2Q8BZT2 Gm12918-201ENSMUST00000120234 636 ntBASIC19.44■□□□□ 0.7
Sh3rf2Q8BZT2 Gm15710-201ENSMUST00000121821 636 ntBASIC19.44■□□□□ 0.7
Sh3rf2Q8BZT2 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sh3rf2Q8BZT2 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Sh3rf2Q8BZT2 Gm5075-201ENSMUST00000196916 622 ntBASIC19.44■□□□□ 0.7
Sh3rf2Q8BZT2 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.44■□□□□ 0.7
Sh3rf2Q8BZT2 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.44■□□□□ 0.7
Sh3rf2Q8BZT2 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.44■□□□□ 0.7
Sh3rf2Q8BZT2 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sh3rf2Q8BZT2 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms