Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp43Q8BUM9 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Usp43Q8BUM9 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp43Q8BUM9 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp43Q8BUM9 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp43Q8BUM9 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp43Q8BUM9 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp43Q8BUM9 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp43Q8BUM9 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp43Q8BUM9 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Usp43Q8BUM9 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp43Q8BUM9 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Usp43Q8BUM9 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp43Q8BUM9 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Usp43Q8BUM9 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Usp43Q8BUM9 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp43Q8BUM9 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp43Q8BUM9 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
Usp43Q8BUM9 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Usp43Q8BUM9 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Usp43Q8BUM9 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.46■□□□□ 0.71
Usp43Q8BUM9 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp43Q8BUM9 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Usp43Q8BUM9 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp43Q8BUM9 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.45■□□□□ 0.7
Usp43Q8BUM9 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp43Q8BUM9 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp43Q8BUM9 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Usp43Q8BUM9 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Usp43Q8BUM9 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.45■□□□□ 0.7
Usp43Q8BUM9 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.45■□□□□ 0.7
Usp43Q8BUM9 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp43Q8BUM9 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp43Q8BUM9 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp43Q8BUM9 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Usp43Q8BUM9 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.45■□□□□ 0.7
Usp43Q8BUM9 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Usp43Q8BUM9 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp43Q8BUM9 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Usp43Q8BUM9 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Usp43Q8BUM9 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Usp43Q8BUM9 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Usp43Q8BUM9 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp43Q8BUM9 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp43Q8BUM9 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
Usp43Q8BUM9 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp43Q8BUM9 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp43Q8BUM9 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp43Q8BUM9 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Usp43Q8BUM9 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.44■□□□□ 0.7
Usp43Q8BUM9 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
Usp43Q8BUM9 Gm43060-201ENSMUST00000200621 289 ntBASIC19.44■□□□□ 0.7
Usp43Q8BUM9 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.44■□□□□ 0.7
Usp43Q8BUM9 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp43Q8BUM9 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Usp43Q8BUM9 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp43Q8BUM9 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp43Q8BUM9 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp43Q8BUM9 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp43Q8BUM9 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Usp43Q8BUM9 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Usp43Q8BUM9 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Usp43Q8BUM9 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Usp43Q8BUM9 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp43Q8BUM9 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
Usp43Q8BUM9 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp43Q8BUM9 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Usp43Q8BUM9 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
Usp43Q8BUM9 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp43Q8BUM9 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp43Q8BUM9 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Usp43Q8BUM9 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Usp43Q8BUM9 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Usp43Q8BUM9 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp43Q8BUM9 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Usp43Q8BUM9 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Usp43Q8BUM9 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.42■□□□□ 0.7
Usp43Q8BUM9 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
Usp43Q8BUM9 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp43Q8BUM9 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp43Q8BUM9 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Usp43Q8BUM9 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Usp43Q8BUM9 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp43Q8BUM9 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Usp43Q8BUM9 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Usp43Q8BUM9 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp43Q8BUM9 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.41■□□□□ 0.7
Usp43Q8BUM9 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.41■□□□□ 0.7
Usp43Q8BUM9 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Usp43Q8BUM9 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp43Q8BUM9 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.41■□□□□ 0.7
Usp43Q8BUM9 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp43Q8BUM9 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp43Q8BUM9 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp43Q8BUM9 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Usp43Q8BUM9 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Usp43Q8BUM9 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp43Q8BUM9 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Usp43Q8BUM9 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.4■□□□□ 0.7
Usp43Q8BUM9 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms