Protein–RNA interactions for Protein: Q8BUE1

Slc9a4, Sodium/hydrogen exchanger 4, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc9a4Q8BUE1 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Slc9a4Q8BUE1 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Slc9a4Q8BUE1 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Slc9a4Q8BUE1 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Slc9a4Q8BUE1 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.11■□□□□ 0.81
Slc9a4Q8BUE1 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Slc9a4Q8BUE1 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.11■□□□□ 0.81
Slc9a4Q8BUE1 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Slc9a4Q8BUE1 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slc9a4Q8BUE1 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.11■□□□□ 0.81
Slc9a4Q8BUE1 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slc9a4Q8BUE1 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.11■□□□□ 0.81
Slc9a4Q8BUE1 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slc9a4Q8BUE1 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slc9a4Q8BUE1 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slc9a4Q8BUE1 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Slc9a4Q8BUE1 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Slc9a4Q8BUE1 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slc9a4Q8BUE1 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slc9a4Q8BUE1 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Slc9a4Q8BUE1 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slc9a4Q8BUE1 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slc9a4Q8BUE1 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slc9a4Q8BUE1 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Slc9a4Q8BUE1 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slc9a4Q8BUE1 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Slc9a4Q8BUE1 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slc9a4Q8BUE1 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC20.1■□□□□ 0.81
Slc9a4Q8BUE1 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Slc9a4Q8BUE1 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slc9a4Q8BUE1 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Slc9a4Q8BUE1 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.1■□□□□ 0.81
Slc9a4Q8BUE1 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Slc9a4Q8BUE1 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slc9a4Q8BUE1 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.09■□□□□ 0.81
Slc9a4Q8BUE1 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Slc9a4Q8BUE1 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
Slc9a4Q8BUE1 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slc9a4Q8BUE1 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slc9a4Q8BUE1 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.09■□□□□ 0.81
Slc9a4Q8BUE1 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.09■□□□□ 0.81
Slc9a4Q8BUE1 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slc9a4Q8BUE1 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slc9a4Q8BUE1 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slc9a4Q8BUE1 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slc9a4Q8BUE1 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Slc9a4Q8BUE1 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Slc9a4Q8BUE1 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Slc9a4Q8BUE1 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Slc9a4Q8BUE1 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Slc9a4Q8BUE1 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Slc9a4Q8BUE1 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Slc9a4Q8BUE1 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Slc9a4Q8BUE1 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Slc9a4Q8BUE1 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.08■□□□□ 0.81
Slc9a4Q8BUE1 Gm7860-201ENSMUST00000121190 879 ntBASIC20.08■□□□□ 0.81
Slc9a4Q8BUE1 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.08■□□□□ 0.81
Slc9a4Q8BUE1 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.08■□□□□ 0.81
Slc9a4Q8BUE1 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Slc9a4Q8BUE1 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Slc9a4Q8BUE1 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Slc9a4Q8BUE1 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
Slc9a4Q8BUE1 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Slc9a4Q8BUE1 Gm15039-201ENSMUST00000118914 875 ntBASIC20.07■□□□□ 0.8
Slc9a4Q8BUE1 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc9a4Q8BUE1 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc9a4Q8BUE1 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc9a4Q8BUE1 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc9a4Q8BUE1 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.07■□□□□ 0.8
Slc9a4Q8BUE1 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc9a4Q8BUE1 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc9a4Q8BUE1 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc9a4Q8BUE1 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.06■□□□□ 0.8
Slc9a4Q8BUE1 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
Slc9a4Q8BUE1 Gm10493-201ENSMUST00000097270 612 ntBASIC20.06■□□□□ 0.8
Slc9a4Q8BUE1 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc9a4Q8BUE1 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Slc9a4Q8BUE1 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc9a4Q8BUE1 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc9a4Q8BUE1 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.06■□□□□ 0.8
Slc9a4Q8BUE1 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slc9a4Q8BUE1 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slc9a4Q8BUE1 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Slc9a4Q8BUE1 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slc9a4Q8BUE1 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.05■□□□□ 0.8
Slc9a4Q8BUE1 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Slc9a4Q8BUE1 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slc9a4Q8BUE1 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.05■□□□□ 0.8
Slc9a4Q8BUE1 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Slc9a4Q8BUE1 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Slc9a4Q8BUE1 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Slc9a4Q8BUE1 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
Slc9a4Q8BUE1 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
Slc9a4Q8BUE1 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.04■□□□□ 0.8
Slc9a4Q8BUE1 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slc9a4Q8BUE1 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slc9a4Q8BUE1 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slc9a4Q8BUE1 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Slc9a4Q8BUE1 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slc9a4Q8BUE1 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms