Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cpne3Q8BT60 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cpne3Q8BT60 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cpne3Q8BT60 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cpne3Q8BT60 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC18.48■□□□□ 0.55
Cpne3Q8BT60 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cpne3Q8BT60 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cpne3Q8BT60 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Cpne3Q8BT60 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Cpne3Q8BT60 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cpne3Q8BT60 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cpne3Q8BT60 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cpne3Q8BT60 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cpne3Q8BT60 Gm9847-201ENSMUST00000052528 599 ntBASIC18.47■□□□□ 0.55
Cpne3Q8BT60 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cpne3Q8BT60 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cpne3Q8BT60 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cpne3Q8BT60 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cpne3Q8BT60 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Cpne3Q8BT60 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cpne3Q8BT60 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cpne3Q8BT60 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cpne3Q8BT60 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Cpne3Q8BT60 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cpne3Q8BT60 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cpne3Q8BT60 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cpne3Q8BT60 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Cpne3Q8BT60 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cpne3Q8BT60 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
Cpne3Q8BT60 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.46■□□□□ 0.55
Cpne3Q8BT60 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cpne3Q8BT60 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cpne3Q8BT60 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cpne3Q8BT60 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.46■□□□□ 0.55
Cpne3Q8BT60 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.54
Cpne3Q8BT60 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.54
Cpne3Q8BT60 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cpne3Q8BT60 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cpne3Q8BT60 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cpne3Q8BT60 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Cpne3Q8BT60 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cpne3Q8BT60 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Cpne3Q8BT60 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cpne3Q8BT60 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cpne3Q8BT60 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Cpne3Q8BT60 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cpne3Q8BT60 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cpne3Q8BT60 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cpne3Q8BT60 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cpne3Q8BT60 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cpne3Q8BT60 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cpne3Q8BT60 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cpne3Q8BT60 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cpne3Q8BT60 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.44■□□□□ 0.54
Cpne3Q8BT60 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cpne3Q8BT60 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cpne3Q8BT60 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Cpne3Q8BT60 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cpne3Q8BT60 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cpne3Q8BT60 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cpne3Q8BT60 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Cpne3Q8BT60 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.43■□□□□ 0.54
Cpne3Q8BT60 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cpne3Q8BT60 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cpne3Q8BT60 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cpne3Q8BT60 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cpne3Q8BT60 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cpne3Q8BT60 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Cpne3Q8BT60 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.43■□□□□ 0.54
Cpne3Q8BT60 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Cpne3Q8BT60 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.43■□□□□ 0.54
Cpne3Q8BT60 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cpne3Q8BT60 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Cpne3Q8BT60 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cpne3Q8BT60 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cpne3Q8BT60 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.43■□□□□ 0.54
Cpne3Q8BT60 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Cpne3Q8BT60 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Cpne3Q8BT60 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cpne3Q8BT60 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Cpne3Q8BT60 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cpne3Q8BT60 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cpne3Q8BT60 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Cpne3Q8BT60 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cpne3Q8BT60 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Cpne3Q8BT60 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cpne3Q8BT60 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cpne3Q8BT60 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cpne3Q8BT60 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Cpne3Q8BT60 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cpne3Q8BT60 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
Cpne3Q8BT60 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cpne3Q8BT60 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.41■□□□□ 0.54
Cpne3Q8BT60 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cpne3Q8BT60 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
Cpne3Q8BT60 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cpne3Q8BT60 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.41■□□□□ 0.54
Cpne3Q8BT60 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cpne3Q8BT60 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cpne3Q8BT60 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms