Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rd3Q8BRE0 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.4■□□□□ 0.86
Rd3Q8BRE0 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Rd3Q8BRE0 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rd3Q8BRE0 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rd3Q8BRE0 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rd3Q8BRE0 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rd3Q8BRE0 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Rd3Q8BRE0 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.86
Rd3Q8BRE0 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rd3Q8BRE0 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Rd3Q8BRE0 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Rd3Q8BRE0 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.39■□□□□ 0.85
Rd3Q8BRE0 Gm7290-201ENSMUST00000104990 617 ntBASIC20.39■□□□□ 0.85
Rd3Q8BRE0 Gm12918-201ENSMUST00000120234 636 ntBASIC20.39■□□□□ 0.85
Rd3Q8BRE0 Gm15710-201ENSMUST00000121821 636 ntBASIC20.39■□□□□ 0.85
Rd3Q8BRE0 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC20.39■□□□□ 0.85
Rd3Q8BRE0 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20.39■□□□□ 0.85
Rd3Q8BRE0 Gm5075-201ENSMUST00000196916 622 ntBASIC20.39■□□□□ 0.85
Rd3Q8BRE0 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.39■□□□□ 0.85
Rd3Q8BRE0 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.39■□□□□ 0.85
Rd3Q8BRE0 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rd3Q8BRE0 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Rd3Q8BRE0 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rd3Q8BRE0 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
Rd3Q8BRE0 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rd3Q8BRE0 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rd3Q8BRE0 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rd3Q8BRE0 Gm13534-201ENSMUST00000121169 513 ntBASIC20.38■□□□□ 0.85
Rd3Q8BRE0 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rd3Q8BRE0 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.38■□□□□ 0.85
Rd3Q8BRE0 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rd3Q8BRE0 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rd3Q8BRE0 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.38■□□□□ 0.85
Rd3Q8BRE0 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rd3Q8BRE0 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rd3Q8BRE0 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Rd3Q8BRE0 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Rd3Q8BRE0 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.37■□□□□ 0.85
Rd3Q8BRE0 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC20.37■□□□□ 0.85
Rd3Q8BRE0 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rd3Q8BRE0 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rd3Q8BRE0 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rd3Q8BRE0 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.36■□□□□ 0.85
Rd3Q8BRE0 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rd3Q8BRE0 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rd3Q8BRE0 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.36■□□□□ 0.85
Rd3Q8BRE0 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rd3Q8BRE0 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rd3Q8BRE0 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rd3Q8BRE0 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rd3Q8BRE0 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rd3Q8BRE0 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rd3Q8BRE0 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.36■□□□□ 0.85
Rd3Q8BRE0 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rd3Q8BRE0 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Rd3Q8BRE0 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rd3Q8BRE0 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Rd3Q8BRE0 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.35■□□□□ 0.85
Rd3Q8BRE0 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Rd3Q8BRE0 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Rd3Q8BRE0 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rd3Q8BRE0 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rd3Q8BRE0 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Rd3Q8BRE0 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.34■□□□□ 0.85
Rd3Q8BRE0 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Rd3Q8BRE0 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Rd3Q8BRE0 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Rd3Q8BRE0 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rd3Q8BRE0 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rd3Q8BRE0 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rd3Q8BRE0 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.33■□□□□ 0.85
Rd3Q8BRE0 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rd3Q8BRE0 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
Rd3Q8BRE0 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Rd3Q8BRE0 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Rd3Q8BRE0 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rd3Q8BRE0 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rd3Q8BRE0 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.33■□□□□ 0.84
Rd3Q8BRE0 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.33■□□□□ 0.84
Rd3Q8BRE0 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.33■□□□□ 0.84
Rd3Q8BRE0 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
Rd3Q8BRE0 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rd3Q8BRE0 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rd3Q8BRE0 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Rd3Q8BRE0 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rd3Q8BRE0 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Rd3Q8BRE0 Gm7860-201ENSMUST00000121190 879 ntBASIC20.32■□□□□ 0.84
Rd3Q8BRE0 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rd3Q8BRE0 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rd3Q8BRE0 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rd3Q8BRE0 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Rd3Q8BRE0 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rd3Q8BRE0 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rd3Q8BRE0 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rd3Q8BRE0 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rd3Q8BRE0 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Rd3Q8BRE0 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rd3Q8BRE0 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rd3Q8BRE0 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC20.31■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms