Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rab11fip4Q8BQP8 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rab11fip4Q8BQP8 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rab11fip4Q8BQP8 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Rab11fip4Q8BQP8 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Rab11fip4Q8BQP8 Gm7291-201ENSMUST00000199147 382 ntBASIC21.22■□□□□ 0.99
Rab11fip4Q8BQP8 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rab11fip4Q8BQP8 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Rab11fip4Q8BQP8 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rab11fip4Q8BQP8 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rab11fip4Q8BQP8 Gm10129-202ENSMUST00000193100 1316 ntBASIC21.22■□□□□ 0.99
Rab11fip4Q8BQP8 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Rab11fip4Q8BQP8 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rab11fip4Q8BQP8 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rab11fip4Q8BQP8 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rab11fip4Q8BQP8 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rab11fip4Q8BQP8 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rab11fip4Q8BQP8 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
Rab11fip4Q8BQP8 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rab11fip4Q8BQP8 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC21.21■□□□□ 0.99
Rab11fip4Q8BQP8 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC21.21■□□□□ 0.99
Rab11fip4Q8BQP8 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC21.21■□□□□ 0.99
Rab11fip4Q8BQP8 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC21.21■□□□□ 0.99
Rab11fip4Q8BQP8 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rab11fip4Q8BQP8 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rab11fip4Q8BQP8 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rab11fip4Q8BQP8 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rab11fip4Q8BQP8 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rab11fip4Q8BQP8 AA386476-201ENSMUST00000098781 1665 ntBASIC21.21■□□□□ 0.99
Rab11fip4Q8BQP8 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Rab11fip4Q8BQP8 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
Rab11fip4Q8BQP8 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rab11fip4Q8BQP8 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC21.2■□□□□ 0.98
Rab11fip4Q8BQP8 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rab11fip4Q8BQP8 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rab11fip4Q8BQP8 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rab11fip4Q8BQP8 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rab11fip4Q8BQP8 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Rab11fip4Q8BQP8 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rab11fip4Q8BQP8 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Rab11fip4Q8BQP8 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Rab11fip4Q8BQP8 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rab11fip4Q8BQP8 Gm29257-201ENSMUST00000186115 639 ntBASIC21.19■□□□□ 0.98
Rab11fip4Q8BQP8 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Rab11fip4Q8BQP8 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rab11fip4Q8BQP8 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rab11fip4Q8BQP8 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Rab11fip4Q8BQP8 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC21.18■□□□□ 0.98
Rab11fip4Q8BQP8 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rab11fip4Q8BQP8 Gm26571-201ENSMUST00000181399 666 ntBASIC21.18■□□□□ 0.98
Rab11fip4Q8BQP8 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Rab11fip4Q8BQP8 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rab11fip4Q8BQP8 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rab11fip4Q8BQP8 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rab11fip4Q8BQP8 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rab11fip4Q8BQP8 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rab11fip4Q8BQP8 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rab11fip4Q8BQP8 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rab11fip4Q8BQP8 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Rab11fip4Q8BQP8 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rab11fip4Q8BQP8 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rab11fip4Q8BQP8 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rab11fip4Q8BQP8 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rab11fip4Q8BQP8 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rab11fip4Q8BQP8 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Rab11fip4Q8BQP8 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rab11fip4Q8BQP8 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Rab11fip4Q8BQP8 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC21.16■□□□□ 0.98
Rab11fip4Q8BQP8 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC21.16■□□□□ 0.98
Rab11fip4Q8BQP8 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC21.16■□□□□ 0.98
Rab11fip4Q8BQP8 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Rab11fip4Q8BQP8 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rab11fip4Q8BQP8 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Rab11fip4Q8BQP8 Gm27405-201ENSMUST00000184201 112 ntBASIC21.16■□□□□ 0.98
Rab11fip4Q8BQP8 Gm18671-201ENSMUST00000214826 683 ntBASIC21.16■□□□□ 0.98
Rab11fip4Q8BQP8 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rab11fip4Q8BQP8 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Rab11fip4Q8BQP8 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rab11fip4Q8BQP8 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rab11fip4Q8BQP8 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rab11fip4Q8BQP8 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Rab11fip4Q8BQP8 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
Rab11fip4Q8BQP8 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC21.15■□□□□ 0.98
Rab11fip4Q8BQP8 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Rab11fip4Q8BQP8 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC21.15■□□□□ 0.98
Rab11fip4Q8BQP8 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rab11fip4Q8BQP8 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rab11fip4Q8BQP8 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Rab11fip4Q8BQP8 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rab11fip4Q8BQP8 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Rab11fip4Q8BQP8 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Rab11fip4Q8BQP8 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rab11fip4Q8BQP8 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rab11fip4Q8BQP8 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rab11fip4Q8BQP8 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rab11fip4Q8BQP8 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Rab11fip4Q8BQP8 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rab11fip4Q8BQP8 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rab11fip4Q8BQP8 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Rab11fip4Q8BQP8 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms