Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sfr1Q8BP27 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sfr1Q8BP27 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sfr1Q8BP27 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sfr1Q8BP27 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sfr1Q8BP27 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sfr1Q8BP27 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.46■□□□□ 0.71
Sfr1Q8BP27 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sfr1Q8BP27 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.46■□□□□ 0.71
Sfr1Q8BP27 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Sfr1Q8BP27 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.46■□□□□ 0.71
Sfr1Q8BP27 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sfr1Q8BP27 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sfr1Q8BP27 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.45■□□□□ 0.7
Sfr1Q8BP27 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sfr1Q8BP27 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sfr1Q8BP27 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Sfr1Q8BP27 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sfr1Q8BP27 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sfr1Q8BP27 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sfr1Q8BP27 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.44■□□□□ 0.7
Sfr1Q8BP27 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
Sfr1Q8BP27 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sfr1Q8BP27 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
Sfr1Q8BP27 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Sfr1Q8BP27 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Sfr1Q8BP27 Gm42900-201ENSMUST00000197184 2167 ntBASIC19.43■□□□□ 0.7
Sfr1Q8BP27 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Sfr1Q8BP27 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sfr1Q8BP27 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.43■□□□□ 0.7
Sfr1Q8BP27 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.43■□□□□ 0.7
Sfr1Q8BP27 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sfr1Q8BP27 Gm10493-201ENSMUST00000097270 612 ntBASIC19.43■□□□□ 0.7
Sfr1Q8BP27 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Sfr1Q8BP27 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Sfr1Q8BP27 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Sfr1Q8BP27 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Sfr1Q8BP27 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sfr1Q8BP27 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sfr1Q8BP27 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sfr1Q8BP27 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
Sfr1Q8BP27 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sfr1Q8BP27 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sfr1Q8BP27 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sfr1Q8BP27 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sfr1Q8BP27 Gm18284-201ENSMUST00000172604 624 ntBASIC19.42■□□□□ 0.7
Sfr1Q8BP27 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sfr1Q8BP27 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sfr1Q8BP27 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sfr1Q8BP27 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sfr1Q8BP27 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sfr1Q8BP27 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.42■□□□□ 0.7
Sfr1Q8BP27 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Sfr1Q8BP27 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.41■□□□□ 0.7
Sfr1Q8BP27 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sfr1Q8BP27 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sfr1Q8BP27 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sfr1Q8BP27 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sfr1Q8BP27 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC19.41■□□□□ 0.7
Sfr1Q8BP27 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.41■□□□□ 0.7
Sfr1Q8BP27 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sfr1Q8BP27 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Sfr1Q8BP27 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Sfr1Q8BP27 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sfr1Q8BP27 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Sfr1Q8BP27 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Sfr1Q8BP27 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sfr1Q8BP27 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sfr1Q8BP27 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
Sfr1Q8BP27 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.4■□□□□ 0.7
Sfr1Q8BP27 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.4■□□□□ 0.7
Sfr1Q8BP27 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Sfr1Q8BP27 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Sfr1Q8BP27 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Sfr1Q8BP27 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Sfr1Q8BP27 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Sfr1Q8BP27 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
Sfr1Q8BP27 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Sfr1Q8BP27 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Sfr1Q8BP27 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.39■□□□□ 0.69
Sfr1Q8BP27 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sfr1Q8BP27 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Sfr1Q8BP27 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sfr1Q8BP27 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Sfr1Q8BP27 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sfr1Q8BP27 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Sfr1Q8BP27 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sfr1Q8BP27 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Sfr1Q8BP27 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
Sfr1Q8BP27 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sfr1Q8BP27 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sfr1Q8BP27 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Sfr1Q8BP27 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sfr1Q8BP27 Gm5874-201ENSMUST00000096101 508 ntBASIC19.38■□□□□ 0.69
Sfr1Q8BP27 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sfr1Q8BP27 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Sfr1Q8BP27 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sfr1Q8BP27 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Sfr1Q8BP27 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.37■□□□□ 0.69
Sfr1Q8BP27 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms