Protein–RNA interactions for Protein: Q8BLR2

Cpne4, Copine-4, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne4Q8BLR2 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Cpne4Q8BLR2 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.17■□□□□ 0.34
Cpne4Q8BLR2 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cpne4Q8BLR2 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.17■□□□□ 0.34
Cpne4Q8BLR2 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cpne4Q8BLR2 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cpne4Q8BLR2 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cpne4Q8BLR2 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cpne4Q8BLR2 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cpne4Q8BLR2 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cpne4Q8BLR2 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cpne4Q8BLR2 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Cpne4Q8BLR2 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cpne4Q8BLR2 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cpne4Q8BLR2 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cpne4Q8BLR2 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cpne4Q8BLR2 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.16■□□□□ 0.34
Cpne4Q8BLR2 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cpne4Q8BLR2 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cpne4Q8BLR2 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Cpne4Q8BLR2 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cpne4Q8BLR2 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cpne4Q8BLR2 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cpne4Q8BLR2 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.15■□□□□ 0.34
Cpne4Q8BLR2 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Cpne4Q8BLR2 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cpne4Q8BLR2 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.15■□□□□ 0.34
Cpne4Q8BLR2 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cpne4Q8BLR2 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cpne4Q8BLR2 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cpne4Q8BLR2 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.15■□□□□ 0.34
Cpne4Q8BLR2 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cpne4Q8BLR2 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cpne4Q8BLR2 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cpne4Q8BLR2 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cpne4Q8BLR2 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cpne4Q8BLR2 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cpne4Q8BLR2 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Cpne4Q8BLR2 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Cpne4Q8BLR2 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cpne4Q8BLR2 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cpne4Q8BLR2 Gm9988-201ENSMUST00000069786 435 ntBASIC17.14■□□□□ 0.33
Cpne4Q8BLR2 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cpne4Q8BLR2 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cpne4Q8BLR2 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Cpne4Q8BLR2 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cpne4Q8BLR2 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.14■□□□□ 0.33
Cpne4Q8BLR2 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cpne4Q8BLR2 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cpne4Q8BLR2 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cpne4Q8BLR2 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cpne4Q8BLR2 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cpne4Q8BLR2 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
Cpne4Q8BLR2 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cpne4Q8BLR2 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.13■□□□□ 0.33
Cpne4Q8BLR2 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.13■□□□□ 0.33
Cpne4Q8BLR2 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cpne4Q8BLR2 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cpne4Q8BLR2 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cpne4Q8BLR2 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cpne4Q8BLR2 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Cpne4Q8BLR2 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.12■□□□□ 0.33
Cpne4Q8BLR2 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.12■□□□□ 0.33
Cpne4Q8BLR2 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.12■□□□□ 0.33
Cpne4Q8BLR2 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.12■□□□□ 0.33
Cpne4Q8BLR2 Gm42778-201ENSMUST00000199644 553 ntBASIC17.12■□□□□ 0.33
Cpne4Q8BLR2 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cpne4Q8BLR2 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cpne4Q8BLR2 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Cpne4Q8BLR2 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Cpne4Q8BLR2 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cpne4Q8BLR2 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpne4Q8BLR2 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
Cpne4Q8BLR2 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.11■□□□□ 0.33
Cpne4Q8BLR2 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpne4Q8BLR2 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpne4Q8BLR2 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.11■□□□□ 0.33
Cpne4Q8BLR2 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpne4Q8BLR2 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Cpne4Q8BLR2 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
Cpne4Q8BLR2 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cpne4Q8BLR2 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpne4Q8BLR2 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Cpne4Q8BLR2 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpne4Q8BLR2 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Cpne4Q8BLR2 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.1■□□□□ 0.33
Cpne4Q8BLR2 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
Cpne4Q8BLR2 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpne4Q8BLR2 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.1■□□□□ 0.33
Cpne4Q8BLR2 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cpne4Q8BLR2 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.1■□□□□ 0.33
Cpne4Q8BLR2 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cpne4Q8BLR2 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cpne4Q8BLR2 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cpne4Q8BLR2 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Cpne4Q8BLR2 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cpne4Q8BLR2 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cpne4Q8BLR2 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.09■□□□□ 0.33
Cpne4Q8BLR2 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cpne4Q8BLR2 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms