Protein–RNA interactions for Protein: Q8BJQ2

Usp1, Ubiquitin carboxyl-terminal hydrolase 1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp1Q8BJQ2 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Usp1Q8BJQ2 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp1Q8BJQ2 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Usp1Q8BJQ2 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Usp1Q8BJQ2 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp1Q8BJQ2 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC20.38■□□□□ 0.85
Usp1Q8BJQ2 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Usp1Q8BJQ2 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Usp1Q8BJQ2 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Usp1Q8BJQ2 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
Usp1Q8BJQ2 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Usp1Q8BJQ2 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp1Q8BJQ2 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
Usp1Q8BJQ2 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Usp1Q8BJQ2 Gm3807-201ENSMUST00000193520 1168 ntBASIC20.37■□□□□ 0.85
Usp1Q8BJQ2 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp1Q8BJQ2 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Usp1Q8BJQ2 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Usp1Q8BJQ2 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Usp1Q8BJQ2 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp1Q8BJQ2 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Usp1Q8BJQ2 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp1Q8BJQ2 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp1Q8BJQ2 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.36■□□□□ 0.85
Usp1Q8BJQ2 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.36■□□□□ 0.85
Usp1Q8BJQ2 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC20.36■□□□□ 0.85
Usp1Q8BJQ2 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp1Q8BJQ2 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC20.36■□□□□ 0.85
Usp1Q8BJQ2 Gm4968-201ENSMUST00000071458 858 ntBASIC20.36■□□□□ 0.85
Usp1Q8BJQ2 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Usp1Q8BJQ2 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Usp1Q8BJQ2 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp1Q8BJQ2 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp1Q8BJQ2 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp1Q8BJQ2 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.35■□□□□ 0.85
Usp1Q8BJQ2 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Usp1Q8BJQ2 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp1Q8BJQ2 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Usp1Q8BJQ2 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.35■□□□□ 0.85
Usp1Q8BJQ2 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp1Q8BJQ2 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Usp1Q8BJQ2 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Usp1Q8BJQ2 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp1Q8BJQ2 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp1Q8BJQ2 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Usp1Q8BJQ2 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC20.34■□□□□ 0.85
Usp1Q8BJQ2 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.34■□□□□ 0.85
Usp1Q8BJQ2 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC20.34■□□□□ 0.85
Usp1Q8BJQ2 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp1Q8BJQ2 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.34■□□□□ 0.85
Usp1Q8BJQ2 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.34■□□□□ 0.85
Usp1Q8BJQ2 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp1Q8BJQ2 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Usp1Q8BJQ2 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Usp1Q8BJQ2 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Usp1Q8BJQ2 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Usp1Q8BJQ2 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Usp1Q8BJQ2 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Usp1Q8BJQ2 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Usp1Q8BJQ2 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
Usp1Q8BJQ2 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.33■□□□□ 0.85
Usp1Q8BJQ2 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Usp1Q8BJQ2 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Usp1Q8BJQ2 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Usp1Q8BJQ2 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Usp1Q8BJQ2 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.33■□□□□ 0.84
Usp1Q8BJQ2 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Usp1Q8BJQ2 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Usp1Q8BJQ2 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Usp1Q8BJQ2 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Usp1Q8BJQ2 Gm13534-201ENSMUST00000121169 513 ntBASIC20.32■□□□□ 0.84
Usp1Q8BJQ2 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Usp1Q8BJQ2 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Usp1Q8BJQ2 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Usp1Q8BJQ2 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Usp1Q8BJQ2 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Usp1Q8BJQ2 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.32■□□□□ 0.84
Usp1Q8BJQ2 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Usp1Q8BJQ2 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.32■□□□□ 0.84
Usp1Q8BJQ2 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Usp1Q8BJQ2 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.31■□□□□ 0.84
Usp1Q8BJQ2 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Usp1Q8BJQ2 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Usp1Q8BJQ2 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Usp1Q8BJQ2 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
Usp1Q8BJQ2 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Usp1Q8BJQ2 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Usp1Q8BJQ2 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Usp1Q8BJQ2 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Usp1Q8BJQ2 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
Usp1Q8BJQ2 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Usp1Q8BJQ2 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Usp1Q8BJQ2 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Usp1Q8BJQ2 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.31■□□□□ 0.84
Usp1Q8BJQ2 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Usp1Q8BJQ2 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Usp1Q8BJQ2 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Usp1Q8BJQ2 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC20.3■□□□□ 0.84
Usp1Q8BJQ2 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Usp1Q8BJQ2 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms