Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc40Q8BI79 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc40Q8BI79 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.9■□□□□ 0.78
Ccdc40Q8BI79 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc40Q8BI79 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Ccdc40Q8BI79 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc40Q8BI79 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc40Q8BI79 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc40Q8BI79 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc40Q8BI79 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc40Q8BI79 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Ccdc40Q8BI79 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ccdc40Q8BI79 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Ccdc40Q8BI79 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.78
Ccdc40Q8BI79 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc40Q8BI79 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc40Q8BI79 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.89■□□□□ 0.77
Ccdc40Q8BI79 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc40Q8BI79 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.89■□□□□ 0.77
Ccdc40Q8BI79 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc40Q8BI79 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.89■□□□□ 0.77
Ccdc40Q8BI79 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC19.89■□□□□ 0.77
Ccdc40Q8BI79 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Ccdc40Q8BI79 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc40Q8BI79 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc40Q8BI79 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Ccdc40Q8BI79 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ccdc40Q8BI79 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc40Q8BI79 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc40Q8BI79 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc40Q8BI79 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc40Q8BI79 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc40Q8BI79 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc40Q8BI79 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc40Q8BI79 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc40Q8BI79 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc40Q8BI79 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc40Q8BI79 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc40Q8BI79 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc40Q8BI79 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc40Q8BI79 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ccdc40Q8BI79 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc40Q8BI79 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc40Q8BI79 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.87■□□□□ 0.77
Ccdc40Q8BI79 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc40Q8BI79 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Ccdc40Q8BI79 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.87■□□□□ 0.77
Ccdc40Q8BI79 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc40Q8BI79 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ccdc40Q8BI79 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc40Q8BI79 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc40Q8BI79 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc40Q8BI79 Gm12821-201ENSMUST00000120022 600 ntBASIC19.86■□□□□ 0.77
Ccdc40Q8BI79 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc40Q8BI79 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.86■□□□□ 0.77
Ccdc40Q8BI79 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.86■□□□□ 0.77
Ccdc40Q8BI79 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc40Q8BI79 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc40Q8BI79 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.86■□□□□ 0.77
Ccdc40Q8BI79 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Ccdc40Q8BI79 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.86■□□□□ 0.77
Ccdc40Q8BI79 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ccdc40Q8BI79 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
Ccdc40Q8BI79 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc40Q8BI79 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc40Q8BI79 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc40Q8BI79 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.85■□□□□ 0.77
Ccdc40Q8BI79 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc40Q8BI79 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc40Q8BI79 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc40Q8BI79 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
Ccdc40Q8BI79 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Ccdc40Q8BI79 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ccdc40Q8BI79 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
Ccdc40Q8BI79 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
Ccdc40Q8BI79 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.84■□□□□ 0.77
Ccdc40Q8BI79 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
Ccdc40Q8BI79 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc40Q8BI79 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc40Q8BI79 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc40Q8BI79 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc40Q8BI79 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc40Q8BI79 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc40Q8BI79 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc40Q8BI79 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc40Q8BI79 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Ccdc40Q8BI79 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc40Q8BI79 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc40Q8BI79 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.83■□□□□ 0.77
Ccdc40Q8BI79 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc40Q8BI79 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.83■□□□□ 0.77
Ccdc40Q8BI79 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc40Q8BI79 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Ccdc40Q8BI79 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ccdc40Q8BI79 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.76
Ccdc40Q8BI79 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ccdc40Q8BI79 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ccdc40Q8BI79 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Ccdc40Q8BI79 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc40Q8BI79 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms