Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Clrn3Q8BHH8 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Clrn3Q8BHH8 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Clrn3Q8BHH8 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.95■□□□□ 0.46
Clrn3Q8BHH8 Gm6139-201ENSMUST00000079261 882 ntBASIC17.95■□□□□ 0.46
Clrn3Q8BHH8 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Clrn3Q8BHH8 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.95■□□□□ 0.46
Clrn3Q8BHH8 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clrn3Q8BHH8 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clrn3Q8BHH8 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Clrn3Q8BHH8 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clrn3Q8BHH8 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC17.94■□□□□ 0.46
Clrn3Q8BHH8 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clrn3Q8BHH8 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Clrn3Q8BHH8 Gm43173-201ENSMUST00000202246 593 ntBASIC17.94■□□□□ 0.46
Clrn3Q8BHH8 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Clrn3Q8BHH8 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clrn3Q8BHH8 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.94■□□□□ 0.46
Clrn3Q8BHH8 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clrn3Q8BHH8 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clrn3Q8BHH8 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clrn3Q8BHH8 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clrn3Q8BHH8 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Clrn3Q8BHH8 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Clrn3Q8BHH8 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.93■□□□□ 0.46
Clrn3Q8BHH8 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clrn3Q8BHH8 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clrn3Q8BHH8 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clrn3Q8BHH8 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Clrn3Q8BHH8 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC17.93■□□□□ 0.46
Clrn3Q8BHH8 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC17.93■□□□□ 0.46
Clrn3Q8BHH8 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Clrn3Q8BHH8 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clrn3Q8BHH8 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Clrn3Q8BHH8 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clrn3Q8BHH8 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Clrn3Q8BHH8 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Clrn3Q8BHH8 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clrn3Q8BHH8 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clrn3Q8BHH8 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.92■□□□□ 0.46
Clrn3Q8BHH8 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clrn3Q8BHH8 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clrn3Q8BHH8 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clrn3Q8BHH8 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.92■□□□□ 0.46
Clrn3Q8BHH8 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Clrn3Q8BHH8 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clrn3Q8BHH8 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clrn3Q8BHH8 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Clrn3Q8BHH8 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clrn3Q8BHH8 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Clrn3Q8BHH8 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Clrn3Q8BHH8 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clrn3Q8BHH8 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clrn3Q8BHH8 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Clrn3Q8BHH8 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.91■□□□□ 0.46
Clrn3Q8BHH8 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clrn3Q8BHH8 Smad6-203ENSMUST00000179458 273 ntBASIC17.91■□□□□ 0.46
Clrn3Q8BHH8 AC137127.1-201ENSMUST00000213466 1078 ntBASIC17.91■□□□□ 0.46
Clrn3Q8BHH8 Serp2-204ENSMUST00000228055 705 ntBASIC17.91■□□□□ 0.46
Clrn3Q8BHH8 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clrn3Q8BHH8 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clrn3Q8BHH8 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Clrn3Q8BHH8 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Clrn3Q8BHH8 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Clrn3Q8BHH8 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clrn3Q8BHH8 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clrn3Q8BHH8 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clrn3Q8BHH8 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
Clrn3Q8BHH8 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Clrn3Q8BHH8 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Clrn3Q8BHH8 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Clrn3Q8BHH8 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Clrn3Q8BHH8 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Clrn3Q8BHH8 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.89■□□□□ 0.45
Clrn3Q8BHH8 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clrn3Q8BHH8 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clrn3Q8BHH8 Rarb-207ENSMUST00000225921 2756 ntBASIC17.89■□□□□ 0.45
Clrn3Q8BHH8 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clrn3Q8BHH8 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Clrn3Q8BHH8 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Clrn3Q8BHH8 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.88■□□□□ 0.45
Clrn3Q8BHH8 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clrn3Q8BHH8 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.88■□□□□ 0.45
Clrn3Q8BHH8 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clrn3Q8BHH8 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clrn3Q8BHH8 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Clrn3Q8BHH8 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Clrn3Q8BHH8 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Clrn3Q8BHH8 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Clrn3Q8BHH8 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.88■□□□□ 0.45
Clrn3Q8BHH8 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Clrn3Q8BHH8 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Clrn3Q8BHH8 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clrn3Q8BHH8 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clrn3Q8BHH8 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clrn3Q8BHH8 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Clrn3Q8BHH8 Gm11421-201ENSMUST00000122124 294 ntBASIC17.87■□□□□ 0.45
Clrn3Q8BHH8 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Clrn3Q8BHH8 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.87■□□□□ 0.45
Clrn3Q8BHH8 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms