Protein–RNA interactions for Protein: Q80XU3

Nucks1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, mousemouse

Known RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nucks1Q80XU3 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nucks1Q80XU3 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.48■□□□□ 0.87
Nucks1Q80XU3 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nucks1Q80XU3 AC140930.3-201ENSMUST00000222935 274 ntBASIC20.48■□□□□ 0.87
Nucks1Q80XU3 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Nucks1Q80XU3 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Nucks1Q80XU3 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nucks1Q80XU3 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nucks1Q80XU3 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.48■□□□□ 0.87
Nucks1Q80XU3 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nucks1Q80XU3 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
Nucks1Q80XU3 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nucks1Q80XU3 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nucks1Q80XU3 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Nucks1Q80XU3 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nucks1Q80XU3 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nucks1Q80XU3 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nucks1Q80XU3 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nucks1Q80XU3 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nucks1Q80XU3 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nucks1Q80XU3 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nucks1Q80XU3 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nucks1Q80XU3 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Nucks1Q80XU3 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.47■□□□□ 0.87
Nucks1Q80XU3 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.47■□□□□ 0.87
Nucks1Q80XU3 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.47■□□□□ 0.87
Nucks1Q80XU3 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Nucks1Q80XU3 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nucks1Q80XU3 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.46■□□□□ 0.87
Nucks1Q80XU3 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Nucks1Q80XU3 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nucks1Q80XU3 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Nucks1Q80XU3 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
Nucks1Q80XU3 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nucks1Q80XU3 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.46■□□□□ 0.87
Nucks1Q80XU3 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nucks1Q80XU3 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.46■□□□□ 0.87
Nucks1Q80XU3 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.46■□□□□ 0.87
Nucks1Q80XU3 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nucks1Q80XU3 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Nucks1Q80XU3 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nucks1Q80XU3 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nucks1Q80XU3 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Nucks1Q80XU3 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Nucks1Q80XU3 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Nucks1Q80XU3 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Nucks1Q80XU3 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Nucks1Q80XU3 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Nucks1Q80XU3 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.45■□□□□ 0.86
Nucks1Q80XU3 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.45■□□□□ 0.86
Nucks1Q80XU3 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nucks1Q80XU3 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Nucks1Q80XU3 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nucks1Q80XU3 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nucks1Q80XU3 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Nucks1Q80XU3 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nucks1Q80XU3 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nucks1Q80XU3 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nucks1Q80XU3 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nucks1Q80XU3 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Nucks1Q80XU3 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Nucks1Q80XU3 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nucks1Q80XU3 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.44■□□□□ 0.86
Nucks1Q80XU3 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.44■□□□□ 0.86
Nucks1Q80XU3 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nucks1Q80XU3 Gm13241-201ENSMUST00000094493 780 ntBASIC20.44■□□□□ 0.86
Nucks1Q80XU3 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nucks1Q80XU3 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nucks1Q80XU3 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Nucks1Q80XU3 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nucks1Q80XU3 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.43■□□□□ 0.86
Nucks1Q80XU3 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nucks1Q80XU3 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
Nucks1Q80XU3 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nucks1Q80XU3 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.43■□□□□ 0.86
Nucks1Q80XU3 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nucks1Q80XU3 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nucks1Q80XU3 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nucks1Q80XU3 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Nucks1Q80XU3 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC20.43■□□□□ 0.86
Nucks1Q80XU3 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC20.42■□□□□ 0.86
Nucks1Q80XU3 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Nucks1Q80XU3 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Nucks1Q80XU3 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.42■□□□□ 0.86
Nucks1Q80XU3 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nucks1Q80XU3 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nucks1Q80XU3 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nucks1Q80XU3 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nucks1Q80XU3 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nucks1Q80XU3 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Nucks1Q80XU3 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Nucks1Q80XU3 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nucks1Q80XU3 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nucks1Q80XU3 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nucks1Q80XU3 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.42■□□□□ 0.86
Nucks1Q80XU3 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nucks1Q80XU3 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Nucks1Q80XU3 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Nucks1Q80XU3 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nucks1Q80XU3 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms