Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
Prpf40bQ80W14 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
Prpf40bQ80W14 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
Prpf40bQ80W14 Gm7977-201ENSMUST00000193787 748 ntBASIC22.18■■□□□ 1.14
Prpf40bQ80W14 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Prpf40bQ80W14 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Prpf40bQ80W14 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Prpf40bQ80W14 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
Prpf40bQ80W14 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Prpf40bQ80W14 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC22.17■■□□□ 1.14
Prpf40bQ80W14 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Prpf40bQ80W14 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC22.17■■□□□ 1.14
Prpf40bQ80W14 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
Prpf40bQ80W14 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Prpf40bQ80W14 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
Prpf40bQ80W14 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Prpf40bQ80W14 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Prpf40bQ80W14 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Prpf40bQ80W14 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC22.16■■□□□ 1.14
Prpf40bQ80W14 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Prpf40bQ80W14 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC22.16■■□□□ 1.14
Prpf40bQ80W14 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Prpf40bQ80W14 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Prpf40bQ80W14 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC22.16■■□□□ 1.14
Prpf40bQ80W14 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Prpf40bQ80W14 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
Prpf40bQ80W14 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Prpf40bQ80W14 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Prpf40bQ80W14 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
Prpf40bQ80W14 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
Prpf40bQ80W14 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Prpf40bQ80W14 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Prpf40bQ80W14 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
Prpf40bQ80W14 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Prpf40bQ80W14 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Prpf40bQ80W14 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
Prpf40bQ80W14 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
Prpf40bQ80W14 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Prpf40bQ80W14 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Prpf40bQ80W14 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Prpf40bQ80W14 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC22.14■■□□□ 1.13
Prpf40bQ80W14 Gm27801-201ENSMUST00000184174 223 ntBASIC22.14■■□□□ 1.13
Prpf40bQ80W14 AC135963.1-201ENSMUST00000211640 717 ntBASIC22.14■■□□□ 1.13
Prpf40bQ80W14 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Prpf40bQ80W14 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Prpf40bQ80W14 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Prpf40bQ80W14 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Prpf40bQ80W14 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Prpf40bQ80W14 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Prpf40bQ80W14 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Prpf40bQ80W14 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Prpf40bQ80W14 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Prpf40bQ80W14 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Prpf40bQ80W14 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
Prpf40bQ80W14 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Prpf40bQ80W14 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Prpf40bQ80W14 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
Prpf40bQ80W14 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Prpf40bQ80W14 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Prpf40bQ80W14 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC22.12■■□□□ 1.13
Prpf40bQ80W14 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC22.12■■□□□ 1.13
Prpf40bQ80W14 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
Prpf40bQ80W14 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
Prpf40bQ80W14 Golph3-202ENSMUST00000226517 2359 ntBASIC22.12■■□□□ 1.13
Prpf40bQ80W14 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Prpf40bQ80W14 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Prpf40bQ80W14 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
Prpf40bQ80W14 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Prpf40bQ80W14 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
Prpf40bQ80W14 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC22.11■■□□□ 1.13
Prpf40bQ80W14 Gm5408-201ENSMUST00000197998 747 ntBASIC22.11■■□□□ 1.13
Prpf40bQ80W14 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Prpf40bQ80W14 Gm10812-201ENSMUST00000099864 546 ntBASIC22.11■■□□□ 1.13
Prpf40bQ80W14 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Prpf40bQ80W14 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Prpf40bQ80W14 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Prpf40bQ80W14 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Prpf40bQ80W14 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Prpf40bQ80W14 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Prpf40bQ80W14 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC22.1■■□□□ 1.13
Prpf40bQ80W14 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Prpf40bQ80W14 Mir6982-201ENSMUST00000184354 68 ntBASIC22.1■■□□□ 1.13
Prpf40bQ80W14 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC22.1■■□□□ 1.13
Prpf40bQ80W14 Gm43859-201ENSMUST00000200075 1412 ntBASIC22.1■■□□□ 1.13
Prpf40bQ80W14 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Prpf40bQ80W14 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC22.09■■□□□ 1.13
Prpf40bQ80W14 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Prpf40bQ80W14 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Prpf40bQ80W14 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Prpf40bQ80W14 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC22.09■■□□□ 1.13
Prpf40bQ80W14 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Prpf40bQ80W14 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Prpf40bQ80W14 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Prpf40bQ80W14 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Prpf40bQ80W14 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC22.08■■□□□ 1.13
Prpf40bQ80W14 Gm13148-201ENSMUST00000118892 745 ntBASIC22.08■■□□□ 1.13
Prpf40bQ80W14 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Prpf40bQ80W14 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Prpf40bQ80W14 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC22.08■■□□□ 1.13
Prpf40bQ80W14 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms